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NECEvent2014_8_6_scaffold_358

Alias: 178_006_scaffold_358

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_358_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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42..1586
DNA (1545bp) protein (515aa)
Putative liporotein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94394.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
family 1 extracellular solute-binding protein
NECEvent2014_8_6_scaffold_358_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1760..3823
DNA (2064bp) protein (688aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1523154 species="Bacteria; Firmicutes; Clostrid
Beta-galactosidase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC2_CLOBU rbh
beta-galactosidase
NECEvent2014_8_6_scaffold_358_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3942..4127
DNA (186bp) protein (62aa)
Uncharacterized transporter YisQ n=1 Tax=Clostridium ultunense Esp RepID=M1ZKZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJZ94415.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
MATE efflux family protein
NECEvent2014_8_6_scaffold_358_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4097..5134
DNA (1038bp) protein (346aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GLY4_9SPHI rbh
NECEvent2014_8_6_scaffold_358_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5547..6572
DNA (1026bp) protein (342aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Glycosyl hydrolase 53 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC1_CLOBU rbh
arabinogalactan endo-1,4-beta-galactosidase
NECEvent2014_8_6_scaffold_358_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7078..7764
DNA (687bp) protein (229aa)
UPI0003D5FF0D related cluster n=1 Tax=unknown RepID=UPI0003D5FF0D rbh
Two-component response regulator {ECO:0000313|EMBL:EEP55966.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
regulatory component of sensory transduction system
NECEvent2014_8_6_scaffold_358_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7751..8740
DNA (990bp) protein (330aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
UPI0003D6486F related cluster n=1 Tax=unknown RepID=UPI0003D6486F rbh
Sensory transduction histidine kinase (HisKA and HATPase_c domains)
NECEvent2014_8_6_scaffold_358_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8824..9510
DNA (687bp) protein (229aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000313|EMBL:EEP56261.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEP56261.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
macB2; macrolide export ATP-binding/permease protein MacB (EC:3.6.3.-)
Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBB8_CLOBU rbh
NECEvent2014_8_6_scaffold_358_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9510..12104
DNA (2595bp) protein (865aa)
UPI0003D68726 related cluster n=1 Tax=unknown RepID=UPI0003D68726 rbh
ABC transporter permease {ECO:0000313|EMBL:KHD14620.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transporter permease
NECEvent2014_8_6_scaffold_358_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12276..12986
DNA (711bp) protein (237aa)
Response regulator n=2 Tax=Clostridium butyricum RepID=M8JCA1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32867.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
LytTr family DNA-binding response regulator
NECEvent2014_8_6_scaffold_358_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12998..13453
DNA (456bp) protein (152aa)
UPI0003D6621E related cluster n=1 Tax=unknown RepID=UPI0003D6621E
Two-component sensor histidine kinase {ECO:0000313|EMBL:KJZ88797.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
Displaying 11 items

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