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NECEvent2014_8_6_scaffold_180_3

Organism: NECEvent2014_8_6_Clostridium_butyricum_29_21

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(2041..2550)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Clostridium butyricum RepID=M8JNT5_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 169.0
  • Bit_score: 336
  • Evalue 2.20e-89
  • rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ35481.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 169.0
  • Bit_score: 336
  • Evalue 3.00e-89
RNA polymerase, sigma subunit, SigV similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 162.0
  • Bit_score: 243
  • Evalue 4.10e-62

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 510
ATGAACAAAAGTTGTTTGGAAAACCAAATAGCAGATTATGTTATCCAATATAAAGAAAATATCTACTGCTTGGCCTTTAGCTATGTAAAAAATGCTGATGATGCTTTAGATATTGTTCAAGAATCCATATATAAAGCCCTATCATCAAAGGATTCTCTGAAAAATCCTAATTATATAAAAACATGGTTTTACAGGATTGTAGTAAATGCTTCTTTAGATTTTTTACGAAAAAAAAGAAAAATTGATGTTGTAGATTCAGAAATTTTTTCTAGTTTAGACCATGGAGTAATTGATGATTATGAAAATGTTGATCTCCAAAAAGCATTGGATAACCTGCCATCAAATTACCGTACAATAATAATTTTACGATACTTTGAAGATTTAAAAATAGATGAAATTGCAGAAATTCTCAATGAAAATATTAATACAATAAAAAGCCGTTTATATAAGTCGCTTAAAATTTTACGTATAAAAATGAATGATTCTGAGGAGGTTTATTATGAAAGATAA
PROTEIN sequence
Length: 170
MNKSCLENQIADYVIQYKENIYCLAFSYVKNADDALDIVQESIYKALSSKDSLKNPNYIKTWFYRIVVNASLDFLRKKRKIDVVDSEIFSSLDHGVIDDYENVDLQKALDNLPSNYRTIIILRYFEDLKIDEIAEILNENINTIKSRLYKSLKILRIKMNDSEEVYYER*