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NECEvent2014_8_6_scaffold_263_2

Organism: NECEvent2014_8_6_Clostridium_butyricum_29_21

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 884..2077

Top 3 Functional Annotations

Value Algorithm Source
cshA1; DEAD-box ATP-dependent RNA helicase CshA (EC:3.6.4.13) similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 378.0
  • Bit_score: 579
  • Evalue 7.40e-163
  • rbh
UPI0003D64683 related cluster n=1 Tax=unknown RepID=UPI0003D64683 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 369.0
  • Bit_score: 720
  • Evalue 7.30e-205
  • rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:KJZ86829.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 369.0
  • Bit_score: 720
  • Evalue 1.00e-204

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1194
TTGACAATTACTAATATTAACTTATACTATAGAAGACAACAATATGATAAATGAGAATATGATAAACGAGGAAGGTTTGATATAATGGATTTCAAAAAACTTGGAATATTTAAAGAATTAGTTGATATATTAAAGAAAAATGGAATTAGTGCACCAACTCCAATTCAAGAGGAAAGCATTGAAATAATAAAAAATGGTAAAGATATAATTGCAGAAGCAGGGACAGGAACTGGAAAAACACTTGCATTTTTACTACCTATATTTGAACAGATAAATCCAAAATCAAAGGATGTTCAAGCACTTATACTTACACCAACAAGAGAGCTTGCACTTCAGATAACAAATGAAGCGGATAAATTAAATGAAGACAAAAAAATAAATGTACTTGCATGCTATGGGGGAAAAGATATAAATTCACAACTTAAAAAGCTTAATAAAAATGTGCAGTTAATAGTTGCAACGCCAGGAAGATTACTAGATCATATAGAAAGGAAGACAATAGATTTAAAGACTGTAAAGATTTTTGTTTTAGATGAAGCGGATCAAATGCTTTTCATGGGATTTAAAAATGAAGTTGAAAAGATAATGGAACAGATGTCAAAGAAAAAGCAGATGCTTTGTTTTTCAGCAACCATGGATTCAGCAGTAAAAAAACTTGCATATAGGTACATGAATGATCCTGCAATTATTTCTGTAAAAAAAGAAGAAGTTGACATGCATTCAATAAAGCAGTTTGTAGTTGAAACAACTGACAGACAGAAAAGAGATGCTTTATGCAAGGTTCTTGATGAAGATAATCCGTTTATGGCTATTATATTCTGTAGAACAAAAAGAAGAGCTGATGATCTTGAAACAGTAATGGCAACAAGAAAGTATAACTGCGCAAAAATACATAGTGATATAGCTCAAAATAAGAGAGAAAGAATCATGAAGTCATTTAGAGAAGCAAAATTACAATATCTTATTGCTACTGATGTTGCTGCAAGAGGACTTGATATTACAGGTGTAACTCATATTTATAATTATGACATTCCTGAAACACCTGAAAGTTATGTACATAGAATAGGAAGAACTGGAAGAGCTGGTGAAAAAGGAATTACATGTATGTTTGTAGATCCTAAAAATAAAAGGGCTTTGGAAGAAATAGAGGATACTATAGGATTTAAAATTCCAAGAAGATCTGTTGAACTTTAA
PROTEIN sequence
Length: 398
LTITNINLYYRRQQYDK*EYDKRGRFDIMDFKKLGIFKELVDILKKNGISAPTPIQEESIEIIKNGKDIIAEAGTGTGKTLAFLLPIFEQINPKSKDVQALILTPTRELALQITNEADKLNEDKKINVLACYGGKDINSQLKKLNKNVQLIVATPGRLLDHIERKTIDLKTVKIFVLDEADQMLFMGFKNEVEKIMEQMSKKKQMLCFSATMDSAVKKLAYRYMNDPAIISVKKEEVDMHSIKQFVVETTDRQKRDALCKVLDEDNPFMAIIFCRTKRRADDLETVMATRKYNCAKIHSDIAQNKRERIMKSFREAKLQYLIATDVAARGLDITGVTHIYNYDIPETPESYVHRIGRTGRAGEKGITCMFVDPKNKRALEEIEDTIGFKIPRRSVEL*