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NECEvent2014_8_6_scaffold_100

Alias: 178_006_scaffold_100

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_100_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..110
DNA (108bp) protein (36aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=B7LBZ3_ECO55
hypothetical protein
Chromosome, complete genome {ECO:0000313|EMBL:CAV01579.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_8_6_scaffold_100_trna_1
unknown

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24..96
DNA (73bp)
transferRNA
NECEvent2014_8_6_scaffold_100_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

716..2254
DNA (1539bp) protein (513aa)
Transcriptional activator CadC n=102 Tax=Escherichia RepID=CADC_ECOLI rbh
cadC; DNA-binding transcriptional activator CadC
Transcriptional activator CadC {ECO:0000313|EMBL:KEN85110.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_8_6_scaffold_100_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2619..3953
DNA (1335bp) protein (445aa)
Probable cadaverine/lysine antiporter n=1294 Tax=Enterobacteriaceae RepID=CADB_ECO57 rbh
cadB; lysine/cadaverine antiporter
Basic amino acid/polyamine antiporter (APA) family transporter {ECO:0000313|EMBL:EOW14483.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriacea
NECEvent2014_8_6_scaffold_100_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4033..6180
DNA (2148bp) protein (716aa)
Lysine decarboxylase, inducible {ECO:0000313|EMBL:EFU33784.1}; EC=4.1.1.18 {ECO:0000313|EMBL:EFU33784.1};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
cadA; lysine decarboxylase 1 (EC:4.1.1.18)
Lysine decarboxylase, inducible n=797 Tax=Enterobacteriaceae RepID=LDCI_ECO57 rbh
NECEvent2014_8_6_scaffold_100_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6239..7696
DNA (1458bp) protein (486aa)
Probable dipeptide and tripeptide permease YjdL n=193 Tax=Escherichia RepID=YJDL_ECOLI rbh
yjdL; putative transporter
Inner membrane transporter YjdL {ECO:0000313|EMBL:EGI08092.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_8_6_scaffold_100_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7933..9450
DNA (1518bp) protein (506aa)
lysU; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase, heat inducible n=681 Tax=Escherichia RepID=SYK2_ECO57 rbh
NECEvent2014_8_6_scaffold_100_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9569..9742)
DNA (174bp) protein (58aa)
Uncharacterized protein YjdO n=1277 Tax=Enterobacteriaceae RepID=YJDO_ECO57
yjdO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ34144.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_100_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9770..10066)
DNA (297bp) protein (99aa)
Uncharacterized protein YjdK n=938 Tax=Enterobacteriaceae RepID=YJDK_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK27508.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_100_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10293..10565)
DNA (273bp) protein (91aa)
Uncharacterized protein YjdJ n=136 Tax=Escherichia RepID=YJDJ_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX52754.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_100_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10577..10807)
DNA (231bp) protein (77aa)
Uncharacterized protein YjdI n=459 Tax=Enterobacteriaceae RepID=YJDI_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEL26461.1}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_100_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10988..12619
DNA (1632bp) protein (544aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
dcuS; two-component sensor kinase (EC:2.7.3.-)
Sensor histidine kinase DcuS n=484 Tax=Enterobacteriaceae RepID=DCUS_ECO57 rbh
NECEvent2014_8_6_scaffold_100_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12616..13335
DNA (720bp) protein (240aa)
Transcriptional regulatory protein DcuR n=1093 Tax=Enterobacteriaceae RepID=DCUR_ECO57 rbh
DcuR family transcriptional regulator
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_8_6_scaffold_100_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13906..15246
DNA (1341bp) protein (447aa)
Anaerobic C4-dicarboxylate transporter DcuB n=1353 Tax=Bacteria RepID=DCUB_ECO57 rbh
anaerobic C4-dicarboxylate transporter
Anaerobic C4-dicarboxylate transporter {ECO:0000256|PIRNR:PIRNR004539}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_8_6_scaffold_100_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15324..16970
DNA (1647bp) protein (549aa)
Fumarate hydratase class I, anaerobic {ECO:0000313|EMBL:KDX22115.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KDX22115.1};; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Fumarate hydratase class I, anaerobic n=120 Tax=Escherichia RepID=FUMB_ECOLI rbh
fumB; fumarate hydratase FumB
NECEvent2014_8_6_scaffold_100_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17093..17722
DNA (630bp) protein (210aa)
Inner membrane protein YjdF n=121 Tax=Escherichia RepID=YJDF_ECOLI rbh
hypothetical protein
Inner membrane protein yjdF {ECO:0000313|EMBL:EMX33532.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_100_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17861..19270)
DNA (1410bp) protein (470aa)
Melibiose carrier protein n=97 Tax=Escherichia RepID=MELB_ECOLI rbh
melB; melibiose:sodium symporter rbh
Melibiose carrier protein {ECO:0000313|EMBL:KGM76897.1}; Melibiose:sodium symporter {ECO:0000313|EMBL:AJB54159.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
NECEvent2014_8_6_scaffold_100_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19385..20740)
DNA (1356bp) protein (452aa)
Alpha-galactosidase {ECO:0000313|EMBL:ENB24177.1}; EC=3.2.1.22 {ECO:0000313|EMBL:ENB24177.1};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
Alpha-galactosidase n=149 Tax=Escherichia RepID=AGAL_ECOLI rbh
glycoside hydrolase family protein
NECEvent2014_8_6_scaffold_100_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21023..21931
DNA (909bp) protein (303aa)
Melibiose operon regulatory protein n=809 Tax=Enterobacteriaceae RepID=MELR_ECOL6 rbh
melR; DNA-binding transcriptional regulator MelR
Melibiose operon regulatory protein {ECO:0000313|EMBL:KEJ43197.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_8_6_scaffold_100_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22127..24397
DNA (2271bp) protein (757aa)
Biodegradative arginine decarboxylase {ECO:0000313|EMBL:EMX81299.1}; EC=4.1.1.19 {ECO:0000313|EMBL:EMX81299.1};; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
Biodegradative arginine decarboxylase n=2 Tax=Escherichia coli RepID=L3ELU8_ECOLX rbh
adiA; biodegradative arginine decarboxylase
NECEvent2014_8_6_scaffold_100_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24722..25483
DNA (762bp) protein (254aa)
HTH-type transcriptional regulator AdiY n=141 Tax=Enterobacteriaceae RepID=ADIY_ECOLI rbh
hypothetical protein
HTH-type transcriptional regulator AdiY {ECO:0000313|EMBL:KDX88801.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_8_6_scaffold_100_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25620..26957
DNA (1338bp) protein (446aa)
Arginine/agmatine antiporter n=1194 Tax=Enterobacteriaceae RepID=ADIC_ECO57 rbh
arginine:agmatin antiporter
Arginine/agmatine antiporter {ECO:0000313|EMBL:EQP99002.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_8_6_scaffold_100_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27061..28704
DNA (1644bp) protein (548aa)
Phosphoethanolamine transferase eptA {ECO:0000313|EMBL:KDY85577.1}; EC=2.7.-.- {ECO:0000313|EMBL:KDY85577.1};; TaxID=1444127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Arylsulfatase n=1 Tax=Escherichia coli MS 196-1 RepID=D8BQW9_ECOLX rbh
putative cell division protein
NECEvent2014_8_6_scaffold_100_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28701..29369
DNA (669bp) protein (223aa)
2-component regulatory system regulatory protein BasR n=875 Tax=Enterobacteriaceae RepID=C3SGU2_ECOLX rbh
basR; DNA-binding transcriptional regulator BasR
Transcriptional regulatory protein BasR {ECO:0000313|EMBL:KEN94074.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_8_6_scaffold_100_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29370..30470
DNA (1101bp) protein (367aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Sensor protein BasS n=3 Tax=Escherichia coli RepID=L3ILJ0_ECOLX rbh
basS; sensor protein BasS/PmrB
NECEvent2014_8_6_scaffold_100_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30446..30535)
DNA (90bp) protein (30aa)
Putative membrane protein PmrR n=479 Tax=Escherichia RepID=PMRR_ECOLI
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOW14461.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_100_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30647..32149)
DNA (1503bp) protein (501aa)
Proline/betaine transporter n=467 Tax=Enterobacteriaceae RepID=PROP_ECO57 rbh
proline/glycine betaine transporter
Proline/betaine transporter {ECO:0000313|EMBL:EMX33522.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_100_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32413..33291)
DNA (879bp) protein (293aa)
Uncharacterized protein YjcZ n=99 Tax=Escherichia RepID=YJCZ_ECOLI rbh
hypothetical protein
YjcZ-like family protein {ECO:0000313|EMBL:KEL26443.1}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_100_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33288..35516)
DNA (2229bp) protein (743aa)
Clamp-binding protein CrfC n=105 Tax=cellular organisms RepID=CRFC_ECOLI rbh
hypothetical protein rbh
50S ribosome-binding GTPase family protein {ECO:0000313|EMBL:KDY57715.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
Displaying 29 items

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