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NECEvent2014_8_6_scaffold_102_22

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(29274..30245)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=2 Tax=Escherichia coli RepID=D7ZNQ5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 323.0
  • Bit_score: 638
  • Evalue 3.90e-180
  • rbh
yhjC; DNA-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 323.0
  • Bit_score: 639
  • Evalue 3.80e-181
Uncharacterized protein {ECO:0000313|EMBL:EIF84600.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 323.0
  • Bit_score: 639
  • Evalue 1.90e-180

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGTTAGAAAAAACAATAAACAATGCGATATGCGCGTTACTGTTTCGCTGTGAACAACAATCGGTCAAAGAAATGGATAAAATTCACGCAATGCAGTTGTTCATCAAAGTCACGGAGCTGGAAAGTTTTTCCCGCGCAGCGGATTTCTTTGCTTTGCCAAAGGGAAGTGTTTCGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCATCGACATCCCGCCAGGAATCGCGAAAAGCCTGTTACTGCCGCGCCTGTCGGAATTTCTCTATCTGCATCCGGGAATTGAGCTGGAACTGAGTAGCCATGACCGTCCGGTAGATATTCTTCATGATGGTTTTGATTGCGTGATACGCACTGGCGCGTTACCGGAAGATGGCGTTATCGCCCGTCCCCTCGGCAAACTGACCATGGTCAACTGTGCCAGTCCGCACTATCTGACGCGCTTTGGTTATCCGCAAAGCCCCGATGATCTGACTTCACACGCAATAGTGCGTTATACACCGCACCTGGGTGTACATCCGTTAGGTTTTGAGGTTGCCAGCGTTAATGGCGTCCAGTGGTTTAAGTCTGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGA
PROTEIN sequence
Length: 324
MLEKTINNAICALLFRCEQQSVKEMDKIHAMQLFIKVTELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEYLD*