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NECEvent2014_8_6_scaffold_255_3

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 2080..2382

Top 3 Functional Annotations

Value Algorithm Source
Paar n=1 Tax=Escherichia coli TA280 RepID=F4UZG6_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 100.0
  • Bit_score: 202
  • Evalue 2.20e-49
Paar {ECO:0000313|EMBL:EGI42067.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 100.0
  • Bit_score: 202
  • Evalue 3.10e-49
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 99.0
  • Bit_score: 166
  • Evalue 2.90e-39

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGATGGCACAACCAGCTGCACGAGTAACTGATATGCATGTTTGTCCTATGATTACTCCAGGAGTCCCCCCCATACCACATATTGGTGGTCCACTTTTGGCGCCAGGAGTGCCTAATGTTCTTATTTCTGGCTTGCCAGCAGTAACATTAGGAAATATGGCTGTTTGTACAGGCCCATTGGATATAGTAACTATGGGAAGTATGAAAGTGTTTATTGGGAGTAAGCCCGCAGCGAGAATGGGAGATAGTTGTGCCCATGGTGGTACTATAATAACTGGATCTCCGATCGTATTATTAGGGTGA
PROTEIN sequence
Length: 101
MMAQPAARVTDMHVCPMITPGVPPIPHIGGPLLAPGVPNVLISGLPAVTLGNMAVCTGPLDIVTMGSMKVFIGSKPAARMGDSCAHGGTIITGSPIVLLG*