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NECEvent2014_8_6_scaffold_1277_2

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(425..568)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=18 Tax=Escherichia coli RepID=M9DNC8_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 47.0
  • Bit_score: 89
  • Evalue 1.00e-15
Integrase, IS481 family {ECO:0000313|EMBL:CDG47818.1}; TaxID=1347341 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia; Serratia symbiotica.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 47.0
  • Bit_score: 90
  • Evalue 8.10e-16
Integrase, catalytic region similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 47.0
  • Bit_score: 88
  • Evalue 6.20e-16

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Taxonomy

Serratia symbiotica → Serratia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 144
ATGGGCGTTTCGCGTGATACGTTTTATCGTTACCGCGAACTGGCCGATGAAGGCGGTGTGGATGCACTGATTAATCGTAGTCGCCGTGCTCCTAACCTTAAGAACCGTACCGATGAGGCAACTGAACATGTAGTGGCACAGTAA
PROTEIN sequence
Length: 48
MGVSRDTFYRYRELADEGGVDALINRSRRAPNLKNRTDEATEHVVAQ*