ggKbase home page

NECEvent2014_8_6_scaffold_2607_2

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1391..1585)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Shigella flexneri serotype 5b (strain 8401) RepID=RS20_SHIF8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 126
  • Evalue 1.00e-26
30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 126
  • Evalue 2.80e-27
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 126
  • Evalue 1.40e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
CGTCGCTCTATGATGCGTACTTTCATCAAGAAAGTATACGCAGCTATCGAAGCTGGCGACAAAGCTGCTGCACAGAAAGCATTTAACGAAATGCAACCGATCGTGGACCGTCAGGCTGCTAAAGGTCTGATCCACAAAAACAAAGCTGCACGTCATAAGGCTAACCTGACTGCACAGATCAACAAACTGGCTTAA
PROTEIN sequence
Length: 65
RRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA*