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NECEvent2014_8_6_scaffold_1453_2

Organism: NECEvent2014_8_6_Clostridium_perfringens_33_5_v_partial

partial RP 35 / 55 MC: 1 BSCG 34 / 51 ASCG 10 / 38
Location: comp(788..3295)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 835.0
  • Bit_score: 1658
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 835.0
  • Bit_score: 1658
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=5 Tax=Clostridium perfringens RepID=RPOB_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 835.0
  • Bit_score: 1658
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2508
GATATATTCGCTACAATAAGTTACCAAATTGGCTTAGCTTATAATATTGGATATGTTGATGATATAGATCACTTAGGAAACAGAAGATTAAGAAGTGTTGGTGAGCTTTTACAAAATCAATTTAGAATTGGTTTATCAAGAATGGAAAGAGTAGTTAAAGAGAGAATGACTATTCAAGACCAAGAAGCTATAACACCACAACAATTAATCAATATAAGACCAGTAGCAGCAGCTATAAAAGAGTTCTTTGGAAGCTCACAGTTATCACAGTTCATGGATCAAACAAACCCATTATCTGAGTTAACTCATAAGAGAAGATTATCAGCTCTTGGACCAGGAGGTCTTTCAAGAGAAAGAGCTGGTTTCGAAGTTAGAGACGTTCACCACTCTCATTATGGTAGAATGTGTCCTATCGAGACTCCAGAGGGACCAAACATAGGTCTTATAAACTCATTAGCTACATATGCTAAAGTTAATGAGTATGGCTTTATTGAAACTCCTTATAGAGTTGTAGATAAAGCAGAAGGTAGAGTAACTGGCGAAATAAGATACTTTACTGCAGATGAGGAAGACCAATACCTAGTAGCTCAGGCTAATGAACCATTAGACGAAAATGGATGCTTTATTGATAAGAAAGTAACTGTTAGAGATAAAGGTGAGGTATTAGTAGTTCCAAGTAAGGATGTTGACTTAATGGACGTTTCTCCAAGACAGCTAGTATCTGTTGCAACAGCAATGATACCTTTCTTAGAGAACGATGACGCATCAAGAGCCCTAATGGGATCAAACATGCAACGTCAAGCAGTTCCTTTATTAAAACCATATGCTCCAATAGTTGGTACTGGAATAGAATACAAAGCAGCTGTAGATTCAGGGGTTCTTCCTAAAGCTAAAAATGCTGGTGAAGTAGTTTATGTAAGTGCTAATGAAGTAAGAGTTAAGAGAGAATTAGATGGTGGTGTTGATACTTATAGACTTCTTAAATTCAAGAGAAGTAACCAAGGTACTTGTATAAACCAAAGACCAATAGTGGCTAAAGGTGACTGGGTACTTAAAGGTGAAGTATTAGCAGATGGACCTTCAACTGATTTAGGAGAAATAGCTTTAGGTAAAAACATAAGAATGGGATTCATTACTTGGGAAGGATATAACTACGAGGATGCTATGCTTATCTCAGAAGAGTTAGTTAGAGAAGACGTATTTACATCAATCCATATAGAAGAATATGAATGCGAAGCTAGAGATACTAAATTAGGACCAGAAGAAATAACTAGAGATATTCCAAACGTAAGTGAGGATGCTTTAAAAGATATAGATGAAAGAGGTATAATCAGAATCGGTGCTGAGGTAAGATCAGGAGATATTCTTGTTGGTAAAGTAACACCAAAAGGAGAAACTGAACTTACTGCTGAGGAAAGATTATTAAGAGCTATCTTTGGTGAAAAAGCTAGAGAAGTTAGAGATACTTCTTTAAGAGTTCCACACGGGGAAGCTGGTATAATAGTAGATGTAAAAGTATTTACAAGAGAAAATGGTGATGATTTATCACCAGGAGTTAATGAACTTGTAAGATGTTACATTGCTCAAAAGAGAAAAATATCTGTTGGAGATAAGATGGCTGGTCGTCACGGTAACAAAGGGGTTATCTCAAGAGTATTACCAGAAGAAGATATGCCATTCTTACCAGATGGTAGACCACTTCAAATATGCTTAAACCCACTAGGGGTTCCATCTCGTATGAACATCGGTCAGGTATTAGAGGTTCACTTAGGATGGGCTGCAAGTGCATTAGGATGGCACATTGCTACACCAGTATTTGATGGTGCTACAGAAACTGATATAGAAGATTGCTTAGAAAAAGCAGGATACAATAGAAACGGAAAAACAGTTTTAAGAGATGGTAGAACTGGTGAAGAGTTTGATAACGAAGTAACAGTTGGTATAATGTACATCTTAAAACTTGCTCACTTAGTTGATGATAAGATCCATGCTAGATCAACAGGACCTTACTCATTAGTAACTCAACAGCCACTTGGTGGTAAGGCACAATTCGGAGGACAAAGATTCGGAGAGATGGAGGTTTGGGCATTAGAAGCATACGGTGCTGCTCATACTCTTCAAGAAATACTTACTGTTAAGTCAGATGATGTTGTAGGTAGAGTTAAAACTTACGAAGCTATTGTTAAAGGTGAAAACATTCCTGAACCAGGAGTGCCAGAATCATTTAAGGTTCTTATTAAAGAACTTCAAGCTTTATGCTTAGACGTTAAAGTTTTAAATGATAATAACCAAGAAGTTAAATTCAAAGAATTAGCTGAAGATGATGATGAAATCGAAGTATTAGAAGTTAACATGGAAGGTACTGAAGATTCAACAACAGAAGAAGCTAAAGAGGAAAAAGGGGAAGCATACATCCCAGCAGAAGAAATTGATGAAGAAATAGACTATGAAAACATAGACTTATTAGACTTCACAAGTGATTTAGACATAGAAGATGATTTTAACTAG
PROTEIN sequence
Length: 836
DIFATISYQIGLAYNIGYVDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVKERMTIQDQEAITPQQLINIRPVAAAIKEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLATYAKVNEYGFIETPYRVVDKAEGRVTGEIRYFTADEEDQYLVAQANEPLDENGCFIDKKVTVRDKGEVLVVPSKDVDLMDVSPRQLVSVATAMIPFLENDDASRALMGSNMQRQAVPLLKPYAPIVGTGIEYKAAVDSGVLPKAKNAGEVVYVSANEVRVKRELDGGVDTYRLLKFKRSNQGTCINQRPIVAKGDWVLKGEVLADGPSTDLGEIALGKNIRMGFITWEGYNYEDAMLISEELVREDVFTSIHIEEYECEARDTKLGPEEITRDIPNVSEDALKDIDERGIIRIGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEAGIIVDVKVFTRENGDDLSPGVNELVRCYIAQKRKISVGDKMAGRHGNKGVISRVLPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGWAASALGWHIATPVFDGATETDIEDCLEKAGYNRNGKTVLRDGRTGEEFDNEVTVGIMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDVKVLNDNNQEVKFKELAEDDDEIEVLEVNMEGTEDSTTEEAKEEKGEAYIPAEEIDEEIDYENIDLLDFTSDLDIEDDFN*