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NECEvent2014_8_6_Enterobacteriales_53_3_hint

NECEvent2014_8_6_Enterobacteriales_53_3
In projects: NECEvent2014_8_6

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_8_6_UNK

Properties

Avg. coverage: 3.35 Longest contig: 2.09 Kbp Bin length: 53.57 Kbp GC content: 53.15 %
Contigs count: 44 Features count: 83 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38

Description

ESOM area

Displaying 44 items
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_6_scaffold_2191 178_006_scaffold_2191
Species: Enterobacter sp. BIDMC 29 (50%)
2 1984 bp 59.27 8.47 86.95
NECEvent2014_8_6_scaffold_3478 178_006_scaffold_3478
Species: Enterobacter sp. 42324 (50%)
2 1113 bp 57.32 5.39 87.33
NECEvent2014_8_6_scaffold_3780 178_006_scaffold_3780
Species: Salmonella enterica (50%)
2 1019 bp 58.88 4.71 99.51
NECEvent2014_8_6_scaffold_3319 178_006_scaffold_3319
Species: Kosakonia radicincitans (100%)
1 1168 bp 49.06 4.62 76.28
NECEvent2014_8_6_scaffold_3498 178_006_scaffold_3498
Order: Enterobacteriales (100%)
3 1107 bp 53.03 4.34 87.26
NECEvent2014_8_6_scaffold_3691 178_006_scaffold_3691
Species: Yokenella regensburgei (50%)
2 1047 bp 56.54 4.30 98.28
NECEvent2014_8_6_scaffold_3800 178_006_scaffold_3800
Species: Citrobacter freundii (100%)
1 1013 bp 51.83 4.15 90.33
NECEvent2014_8_6_scaffold_3434 178_006_scaffold_3434
Species: Burkholderia mallei (50%)
2 1126 bp 47.07 4.00 82.33
NECEvent2014_8_6_scaffold_3779 178_006_scaffold_3779
Species: Enterobacter sp. R4-368 (100%)
1 1019 bp 57.90 3.68 99.80
NECEvent2014_8_6_scaffold_2747 178_006_scaffold_2747
Order: Enterobacteriales (100%)
3 1475 bp 52.88 3.66 91.53
NECEvent2014_8_6_scaffold_3617 178_006_scaffold_3617
Species: Enterobacter cloacae (50%)
2 1069 bp 56.41 3.65 99.06
NECEvent2014_8_6_scaffold_3037 178_006_scaffold_3037
Species: Enterobacter sp. R4-368 (50%)
2 1307 bp 53.48 3.44 100.31
NECEvent2014_8_6_scaffold_3375 178_006_scaffold_3375
Species: Enterobacter sp. 638 (50%)
2 1143 bp 54.24 3.41 95.80
NECEvent2014_8_6_scaffold_3636 178_006_scaffold_3636
Species: Enterobacter cloacae (50%)
2 1063 bp 53.06 3.39 100.19
NECEvent2014_8_6_scaffold_2911 178_006_scaffold_2911
Order: Enterobacteriales (100%)
3 1373 bp 46.47 3.39 58.99
NECEvent2014_8_6_scaffold_3815 178_006_scaffold_3815
Species: Cronobacter malonaticus (50%)
2 1010 bp 48.42 3.27 75.74
NECEvent2014_8_6_scaffold_3258 178_006_scaffold_3258
Species: Salmonella bongori (50%)
2 1198 bp 56.09 3.26 99.92
NECEvent2014_8_6_scaffold_3764 178_006_scaffold_3764
Species: Escherichia coli (100%)
2 1024 bp 56.93 3.22 99.61
NECEvent2014_8_6_scaffold_3664 178_006_scaffold_3664
Species: Enterobacter lignolyticus (100%)
1 1055 bp 56.78 3.13 99.81
NECEvent2014_8_6_scaffold_3135 178_006_scaffold_3135
Species: Cronobacter muytjensii (50%)
2 1253 bp 53.63 3.11 98.88
NECEvent2014_8_6_scaffold_2655 178_006_scaffold_2655
Species: Cronobacter malonaticus (50%)
2 1552 bp 54.70 3.09 105.35
NECEvent2014_8_6_scaffold_2717 178_006_scaffold_2717
Order: Enterobacteriales (66.67%)
3 1506 bp 42.63 2.99 75.90
NECEvent2014_8_6_scaffold_3041 178_006_scaffold_3041
Species: Enterobacter sp. YD4 (100%)
1 1306 bp 61.18 2.99 99.92
NECEvent2014_8_6_scaffold_3835 178_006_scaffold_3835
Species: Citrobacter amalonaticus (50%)
2 1005 bp 54.53 2.99 65.97
NECEvent2014_8_6_scaffold_3830 178_006_scaffold_3830
Species: Enterobacter aerogenes (50%)
2 1006 bp 47.51 2.98 78.13
NECEvent2014_8_6_scaffold_2981 178_006_scaffold_2981
Species: Klebsiella sp. (100%)
1 1333 bp 55.59 2.93 99.93
NECEvent2014_8_6_scaffold_2813 178_006_scaffold_2813
Species: Cronobacter dublinensis (50%)
2 1439 bp 45.31 2.92 58.37
NECEvent2014_8_6_scaffold_2649 178_006_scaffold_2649
Species: Raoultella ornithinolytica (100%)
2 1556 bp 52.76 2.89 96.40
NECEvent2014_8_6_scaffold_3718 178_006_scaffold_3718
Species: Escherichia coli (100%)
1 1037 bp 54.48 2.89 99.81
NECEvent2014_8_6_scaffold_2955 178_006_scaffold_2955
Species: Enterobacter sp. R4-368 (50%)
2 1349 bp 55.89 2.89 100.30
NECEvent2014_8_6_scaffold_3675 178_006_scaffold_3675
Species: Enterobacter sp. R4-368 (50%)
2 1051 bp 52.62 2.85 86.20
NECEvent2014_8_6_scaffold_3598 178_006_scaffold_3598
Species: Kosakonia radicincitans (50%)
2 1072 bp 45.90 2.80 88.15
NECEvent2014_8_6_scaffold_3051 178_006_scaffold_3051
Species: Pluralibacter gergoviae (100%)
1 1300 bp 50.77 2.77 87.46
NECEvent2014_8_6_scaffold_3242 178_006_scaffold_3242
Species: Klebsiella variicola (100%)
1 1204 bp 47.67 2.74 68.52
NECEvent2014_8_6_scaffold_3665 178_006_scaffold_3665
Species: Enterobacter sp. R4-368 (50%)
2 1055 bp 61.23 2.70 100.38
NECEvent2014_8_6_scaffold_3786 178_006_scaffold_3786
Species: Enterobacter cloacae (100%)
1 1018 bp 56.78 2.65 99.90
NECEvent2014_8_6_scaffold_3225 178_006_scaffold_3225
Species: Enterobacter lignolyticus (50%)
2 1209 bp 59.31 2.61 100.25
NECEvent2014_8_6_scaffold_3534 178_006_scaffold_3534
Species: Klebsiella oxytoca (50%)
2 1095 bp 53.97 2.47 99.73
NECEvent2014_8_6_scaffold_3527 178_006_scaffold_3527
Species: Escherichia coli (50%)
2 1096 bp 45.71 2.46 97.72
NECEvent2014_8_6_scaffold_3357 178_006_scaffold_3357
Species: Klebsiella oxytoca (50%)
2 1149 bp 54.40 2.35 100.52
NECEvent2014_8_6_scaffold_3698 178_006_scaffold_3698
Species: Kosakonia sacchari (50%)
2 1044 bp 50.57 2.30 72.70
NECEvent2014_8_6_scaffold_2106 178_006_scaffold_2106
Species: Escherichia vulneris (66.67%)
3 2094 bp 55.40 2.29 98.28
NECEvent2014_8_6_scaffold_2811 178_006_scaffold_2811
Species: Salmonella enterica (50%)
2 1440 bp 50.07 2.29 94.58
NECEvent2014_8_6_scaffold_3555 178_006_scaffold_3555
Species: Kosakonia radicincitans (50%)
2 1086 bp 50.28 1.93 69.06
Displaying 44 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.