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NECEvent2014_8_7_scaffold_1161

Alias: 178_007_scaffold_1161

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_7_scaffold_1161_1

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47..289
DNA (243bp) protein (81aa)
Conserved domain protein n=3 Tax=Clostridium butyricum RepID=C4ICV4_CLOBU
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ETJ16625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AbrB family transcriptional regulator
NECEvent2014_8_7_scaffold_1161_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(386..1231)
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
rsmI; ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A2F2_CLOBU rbh
NECEvent2014_8_7_scaffold_1161_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1235..1987)
DNA (753bp) protein (251aa)
tRNA (Adenine37-N(6))-methyltransferase TrmN6 {ECO:0000313|EMBL:KJZ85721.1}; EC=2.1.1.223 {ECO:0000313|EMBL:KJZ85721.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
Methyltransferase small n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9L9_CLOBU rbh
small; methyltransferase Small
NECEvent2014_8_7_scaffold_1161_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2382..3662)
DNA (1281bp) protein (427aa)
NLP/P60 protein n=2 Tax=Clostridium butyricum RepID=C4ICV1_CLOBU rbh
Glycoside hydrolase {ECO:0000313|EMBL:KHD15458.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
protein P54
NECEvent2014_8_7_scaffold_1161_trna_1
unknown

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3953..4025
DNA (73bp)
transferRNA
NECEvent2014_8_7_scaffold_1161_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4112..4756
DNA (645bp) protein (215aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4ICV0_CLOBU rbh
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EEP55867.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
haloacid dehalogenase superfamily
Displaying 6 items

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