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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_1321 178_007_scaffold_1321
Species: Clostridium butyricum (83.33%)
6 4295 bp 31.11 17.18 93.60
NECEvent2014_8_7_scaffold_563 178_007_scaffold_563
Species: Clostridium butyricum (66.67%)
6 8636 bp 31.98 15.18 91.71
NECEvent2014_8_7_scaffold_1600 178_007_scaffold_1600
Species: Clostridium butyricum (83.33%)
6 3590 bp 28.80 9.28 84.32
NECEvent2014_8_7_scaffold_1090 178_007_scaffold_1090
Genus: Clostridium (83.33%)
6 5002 bp 30.69 9.96 92.48
NECEvent2014_8_7_scaffold_1346 178_007_scaffold_1346
Genus: Clostridium (100%)
6 4249 bp 30.03 14.54 94.05
NECEvent2014_8_7_scaffold_1101 178_007_scaffold_1101
Species: Clostridium butyricum (66.67%)
6 4957 bp 29.86 11.86 92.35
NECEvent2014_8_7_scaffold_864 178_007_scaffold_864
Species: Clostridium sp. IBUN13A (50%)
6 6169 bp 30.49 12.81 91.23
NECEvent2014_8_7_scaffold_870 178_007_scaffold_870
Species: Clostridium sp. IBUN125C (50%)
6 6145 bp 30.46 10.15 94.22
NECEvent2014_8_7_scaffold_626 178_007_scaffold_626
Species: Clostridium sp. IBUN125C (50%)
6 8141 bp 29.74 14.11 84.06
NECEvent2014_8_7_scaffold_1161 178_007_scaffold_1161
Genus: Clostridium (66.67%)
6 4795 bp 30.22 12.26 80.10
NECEvent2014_8_7_scaffold_2186 178_007_scaffold_2186
Species: Clostridium sp. IBUN125C (50%)
6 2686 bp 28.93 14.69 77.40
NECEvent2014_8_7_scaffold_1174 178_007_scaffold_1174
Genus: Clostridium (83.33%)
6 4751 bp 32.22 18.03 82.97
NECEvent2014_8_7_scaffold_1431 178_007_scaffold_1431
Species: Clostridium sp. IBUN125C (83.33%)
6 3988 bp 30.27 9.59 90.65
NECEvent2014_8_7_scaffold_926 178_007_scaffold_926
Species: Clostridium butyricum (50%)
6 5853 bp 27.88 8.61 89.13
NECEvent2014_8_7_scaffold_2218 178_007_scaffold_2218
Species: Clostridium butyricum (83.33%)
6 2636 bp 32.02 18.10 88.66
NECEvent2014_8_7_scaffold_940 178_007_scaffold_940
Species: Clostridium butyricum (66.67%)
6 5798 bp 32.48 12.21 95.62
NECEvent2014_8_7_scaffold_1452 178_007_scaffold_1452
Species: Clostridium butyricum (50%)
6 3933 bp 31.58 10.79 96.72
NECEvent2014_8_7_scaffold_1457 178_007_scaffold_1457
Species: Clostridium sp. IBUN125C (50%)
6 3903 bp 26.98 10.15 80.71
NECEvent2014_8_7_scaffold_1713 178_007_scaffold_1713
Species: Clostridium butyricum (50%)
6 3361 bp 30.73 13.08 93.10
NECEvent2014_8_7_scaffold_946 178_007_scaffold_946
Genus: Clostridium (100%)
6 5763 bp 29.59 10.72 98.85
NECEvent2014_8_7_scaffold_1202 178_007_scaffold_1202
Species: Clostridium sp. IBUN13A (50%)
6 4648 bp 29.20 9.62 87.07
NECEvent2014_8_7_scaffold_705 178_007_scaffold_705
Species: Clostridium butyricum (66.67%)
6 7436 bp 31.78 14.16 91.46
NECEvent2014_8_7_scaffold_1480 178_007_scaffold_1480
Species: Clostridium butyricum (50%)
6 3866 bp 30.29 13.00 92.27
NECEvent2014_8_7_scaffold_1482 178_007_scaffold_1482
Species: Clostridium butyricum (50%)
6 3864 bp 31.68 15.53 84.86
NECEvent2014_8_7_scaffold_723 178_007_scaffold_723
Species: Clostridium butyricum (50%)
6 7275 bp 30.71 16.00 90.47
NECEvent2014_8_7_scaffold_725 178_007_scaffold_725
Species: Clostridium butyricum (50%)
6 7268 bp 31.41 13.95 89.16
NECEvent2014_8_7_scaffold_992 178_007_scaffold_992
Species: Clostridium butyricum (66.67%)
6 5511 bp 29.58 9.06 93.52
NECEvent2014_8_7_scaffold_999 178_007_scaffold_999
Species: Clostridium butyricum (80%)
5 5471 bp 30.05 12.31 94.15
NECEvent2014_8_7_scaffold_1514 178_007_scaffold_1514
Genus: Clostridium (80%)
5 3802 bp 31.22 8.01 99.74
NECEvent2014_8_7_scaffold_1775 178_007_scaffold_1775
Genus: Clostridium (100%)
5 3238 bp 29.28 11.03 87.46
NECEvent2014_8_7_scaffold_1264 178_007_scaffold_1264
Species: Clostridium butyricum (60%)
5 4440 bp 33.06 17.26 96.89
NECEvent2014_8_7_scaffold_1011 178_007_scaffold_1011
Species: Clostridium sp. IBUN125C (80%)
5 5397 bp 28.89 12.78 71.48
NECEvent2014_8_7_scaffold_1269 178_007_scaffold_1269
Species: Clostridium sp. IBUN125C (60%)
5 4432 bp 29.92 13.74 89.49
NECEvent2014_8_7_scaffold_2037 178_007_scaffold_2037
Species: Clostridium butyricum (80%)
5 2865 bp 28.41 9.32 93.61
NECEvent2014_8_7_scaffold_1015 178_007_scaffold_1015
Species: Clostridium sp. IBUN13A (80%)
5 5380 bp 32.27 13.49 95.13
NECEvent2014_8_7_scaffold_1277 178_007_scaffold_1277
Species: Clostridium sp. IBUN125C (60%)
5 4416 bp 30.53 11.21 94.16
NECEvent2014_8_7_scaffold_766 178_007_scaffold_766
Species: Clostridium butyricum (60%)
5 6894 bp 30.32 16.36 88.73
NECEvent2014_8_7_scaffold_1542 178_007_scaffold_1542
Genus: Clostridium (100%)
5 3746 bp 30.73 14.58 93.70
NECEvent2014_8_7_scaffold_784 178_007_scaffold_784
Species: Clostridium butyricum (80%)
5 6777 bp 30.65 12.93 90.62
NECEvent2014_8_7_scaffold_2324 178_007_scaffold_2324
Genus: Clostridium (80%)
5 2511 bp 29.55 9.20 74.19
NECEvent2014_8_7_scaffold_1047 178_007_scaffold_1047
Species: Clostridium sp. IBUN125C (60%)
5 5210 bp 30.86 17.79 89.25
NECEvent2014_8_7_scaffold_1820 178_007_scaffold_1820
Genus: Clostridium (100%)
5 3169 bp 31.43 22.15 84.44
NECEvent2014_8_7_scaffold_803 178_007_scaffold_803
Species: Clostridium butyricum (60%)
5 6655 bp 30.19 11.50 87.81
NECEvent2014_8_7_scaffold_1327 178_007_scaffold_1327
Genus: Clostridium (100%)
5 4285 bp 29.71 12.95 88.07
NECEvent2014_8_7_scaffold_1079 178_007_scaffold_1079
Species: Clostridium butyricum (60%)
5 5052 bp 30.07 13.42 87.71
NECEvent2014_8_7_scaffold_2362 178_007_scaffold_2362
Species: Clostridium butyricum (60%)
5 2470 bp 30.85 13.48 77.13
NECEvent2014_8_7_scaffold_827 178_007_scaffold_827
Species: Clostridium butyricum (60%)
5 6447 bp 29.36 11.73 90.79
NECEvent2014_8_7_scaffold_573 178_007_scaffold_573
Genus: Clostridium (100%)
5 8567 bp 33.92 12.62 94.58
NECEvent2014_8_7_scaffold_1086 178_007_scaffold_1086
Species: Clostridium butyricum (60%)
5 5015 bp 31.41 16.57 93.56
NECEvent2014_8_7_scaffold_839 178_007_scaffold_839
Species: Clostridium sp. IBUN125C (80%)
5 6386 bp 28.37 10.43 95.69
Displaying items 51-100 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.