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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1001-1050 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_2581 178_007_scaffold_2581
Species: Clostridium butyricum (66.67%)
3 2275 bp 26.73 7.71 85.58
NECEvent2014_8_7_scaffold_5459 178_007_scaffold_5459
Species: Clostridium sp. IBUN13A (100%)
1 1206 bp 27.36 7.71 97.51
NECEvent2014_8_7_scaffold_2738 178_007_scaffold_2738
Species: Clostridium sp. IBUN125C (50%)
2 2159 bp 28.35 7.71 89.76
NECEvent2014_8_7_scaffold_1898 178_007_scaffold_1898
Species: Clostridium sp. IBUN13A (50%)
2 3079 bp 29.65 7.70 94.90
NECEvent2014_8_7_scaffold_3899 178_007_scaffold_3899
Species: Clostridium butyricum (50%)
2 1599 bp 27.89 7.69 98.50
NECEvent2014_8_7_scaffold_3794 178_007_scaffold_3794
Species: Clostridium sp. IBUN13A (66.67%)
3 1639 bp 29.96 7.69 87.13
NECEvent2014_8_7_scaffold_4913 178_007_scaffold_4913
Species: Clostridium butyricum (50%)
2 1328 bp 27.64 7.68 92.85
NECEvent2014_8_7_scaffold_6721 178_007_scaffold_6721
Species: Clostridium sp. IBUN125C (66.67%)
3 1016 bp 29.82 7.68 78.84
NECEvent2014_8_7_scaffold_2112 178_007_scaffold_2112
Genus: Clostridium (100%)
3 2777 bp 25.10 7.67 75.41
NECEvent2014_8_7_scaffold_5983 178_007_scaffold_5983
Species: Clostridium sp. IBUN125C (100%)
2 1118 bp 26.03 7.65 96.60
NECEvent2014_8_7_scaffold_2322 178_007_scaffold_2322
Species: Clostridium sp. IBUN125C (50%)
4 2514 bp 26.45 7.64 92.96
NECEvent2014_8_7_scaffold_2918 178_007_scaffold_2918
Species: Clostridium sp. IBUN13A (50%)
2 2043 bp 28.24 7.64 91.04
NECEvent2014_8_7_scaffold_4784 178_007_scaffold_4784
Species: Clostridium sp. IBUN125C (100%)
2 1355 bp 29.59 7.64 92.55
NECEvent2014_8_7_scaffold_1089 178_007_scaffold_1089
Species: Clostridium sp. IBUN125C (50%)
4 5002 bp 31.89 7.59 83.31
NECEvent2014_8_7_scaffold_6052 178_007_scaffold_6052
Species: Clostridium sp. IBUN125C (100%)
1 1107 bp 27.28 7.59 81.57
NECEvent2014_8_7_scaffold_1971 178_007_scaffold_1971
Species: Clostridium sp. IBUN125C (66.67%)
3 2963 bp 28.18 7.59 92.24
NECEvent2014_8_7_scaffold_4910 178_007_scaffold_4910
Species: Clostridium sp. IBUN125C (100%)
1 1328 bp 30.72 7.57 91.04
NECEvent2014_8_7_scaffold_3051 178_007_scaffold_3051
Species: Clostridium sp. IBUN125C (100%)
1 1984 bp 28.83 7.56 99.04
NECEvent2014_8_7_scaffold_4195 178_007_scaffold_4195
Species: Clostridium sp. IBUN125C (100%)
1 1508 bp 30.84 7.56 99.27
NECEvent2014_8_7_scaffold_3520 178_007_scaffold_3520
Species: Clostridium butyricum (100%)
1 1748 bp 31.01 7.55 99.89
NECEvent2014_8_7_scaffold_2496 178_007_scaffold_2496
Species: Clostridium sp. IBUN125C (75%)
4 2346 bp 27.32 7.54 98.21
NECEvent2014_8_7_scaffold_3399 178_007_scaffold_3399
Species: Clostridium butyricum (75%)
4 1798 bp 28.09 7.51 93.10
NECEvent2014_8_7_scaffold_3893 178_007_scaffold_3893
Species: Clostridium butyricum (100%)
1 1601 bp 25.11 7.50 99.88
NECEvent2014_8_7_scaffold_6541 178_007_scaffold_6541
Species: Clostridium sp. IBUN13A (100%)
1 1040 bp 25.77 7.50 90.29
NECEvent2014_8_7_scaffold_6529 178_007_scaffold_6529
Species: Clostridium butyricum (50%)
2 1043 bp 28.09 7.48 80.25
NECEvent2014_8_7_scaffold_2520 178_007_scaffold_2520
Species: Clostridium sp. IBUN125C (50%)
2 2327 bp 29.69 7.48 100.69
NECEvent2014_8_7_scaffold_3306 178_007_scaffold_3306
Species: Clostridium butyricum (100%)
1 1851 bp 25.61 7.46 80.39
NECEvent2014_8_7_scaffold_4821 178_007_scaffold_4821
Species: Clostridium sp. IBUN125C (100%)
3 1347 bp 27.32 7.46 79.96
NECEvent2014_8_7_scaffold_4632 178_007_scaffold_4632
Species: Clostridium sp. IBUN125C (50%)
2 1389 bp 27.57 7.45 92.01
NECEvent2014_8_7_scaffold_5922 178_007_scaffold_5922
Species: Clostridium sp. IBUN13A (100%)
1 1127 bp 29.02 7.45 99.82
NECEvent2014_8_7_scaffold_2162 178_007_scaffold_2162
Species: Clostridium sp. IBUN125C (50%)
2 2717 bp 27.13 7.45 79.94
NECEvent2014_8_7_scaffold_5252 178_007_scaffold_5252
Species: human gut metagenome (50%)
2 1249 bp 30.34 7.45 93.43
NECEvent2014_8_7_scaffold_5442 178_007_scaffold_5442
Species: Clostridium sp. IBUN125C (50%)
2 1209 bp 28.04 7.44 81.64
NECEvent2014_8_7_scaffold_2848 178_007_scaffold_2848
Species: Clostridium butyricum (100%)
4 2100 bp 28.62 7.43 99.14
NECEvent2014_8_7_scaffold_5888 178_007_scaffold_5888
Species: Clostridium sp. IBUN125C (100%)
2 1132 bp 27.65 7.42 71.02
NECEvent2014_8_7_scaffold_4689 178_007_scaffold_4689
Species: Clostridium butyricum (100%)
1 1375 bp 30.91 7.42 90.11
NECEvent2014_8_7_scaffold_3443 178_007_scaffold_3443
Species: Clostridium sp. IBUN125C (100%)
2 1782 bp 28.62 7.41 91.92
NECEvent2014_8_7_scaffold_6144 178_007_scaffold_6144
Species: Clostridium butyricum (100%)
1 1095 bp 28.68 7.40 85.21
NECEvent2014_8_7_scaffold_2342 178_007_scaffold_2342
Genus: Clostridium (100%)
3 2493 bp 30.08 7.40 90.73
NECEvent2014_8_7_scaffold_3640 178_007_scaffold_3640
Species: Clostridium butyricum (50%)
2 1702 bp 28.03 7.40 74.97
NECEvent2014_8_7_scaffold_2395 178_007_scaffold_2395
Species: Clostridium sp. IBUN125C (66.67%)
3 2435 bp 30.31 7.39 87.72
NECEvent2014_8_7_scaffold_6583 178_007_scaffold_6583
Species: Clostridium sp. IBUN22A (50%)
2 1035 bp 28.79 7.39 89.28
NECEvent2014_8_7_scaffold_5857 178_007_scaffold_5857
Species: Clostridium butyricum (100%)
1 1137 bp 32.89 7.39 96.31
NECEvent2014_8_7_scaffold_3345 178_007_scaffold_3345
Genus: Clostridium (100%)
3 1830 bp 28.31 7.38 93.61
NECEvent2014_8_7_scaffold_5011 178_007_scaffold_5011
Species: Clostridium sp. IBUN125C (100%)
2 1300 bp 27.54 7.38 88.62
NECEvent2014_8_7_scaffold_3733 178_007_scaffold_3733
Species: Clostridium sp. IBUN125C (66.67%)
3 1667 bp 28.49 7.38 94.30
NECEvent2014_8_7_scaffold_4839 178_007_scaffold_4839
Species: Clostridium sp. IBUN125C (50%)
2 1344 bp 27.60 7.37 54.46
NECEvent2014_8_7_scaffold_6414 178_007_scaffold_6414
Species: Clostridium sp. IBUN13A (50%)
2 1058 bp 27.32 7.37 100.95
NECEvent2014_8_7_scaffold_2995 178_007_scaffold_2995
Species: Clostridium sp. IBUN125C (100%)
1 2006 bp 30.71 7.33 97.21
NECEvent2014_8_7_scaffold_2562 178_007_scaffold_2562
Species: Clostridium butyricum (66.67%)
3 2295 bp 26.80 7.32 92.29
Displaying items 1001-1050 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.