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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1051-1100 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_4615 178_007_scaffold_4615
Species: Clostridium butyricum (100%)
1 1393 bp 26.13 7.32 99.93
NECEvent2014_8_7_scaffold_2860 178_007_scaffold_2860
Species: Clostridium sp. IBUN22A (50%)
2 2090 bp 26.41 7.32 70.91
NECEvent2014_8_7_scaffold_4970 178_007_scaffold_4970
Species: Clostridium butyricum (100%)
3 1312 bp 25.69 7.32 69.05
NECEvent2014_8_7_scaffold_3891 178_007_scaffold_3891
Species: Clostridium butyricum (66.67%)
3 1601 bp 25.73 7.31 70.27
NECEvent2014_8_7_scaffold_2506 178_007_scaffold_2506
Species: Clostridium butyricum (75%)
4 2342 bp 25.83 7.30 73.40
NECEvent2014_8_7_scaffold_6306 178_007_scaffold_6306
Species: Clostridium sp. IBUN22A (100%)
1 1072 bp 28.82 7.28 99.91
NECEvent2014_8_7_scaffold_2287 178_007_scaffold_2287
Species: Clostridium sp. IBUN125C (50%)
2 2558 bp 27.40 7.27 97.69
NECEvent2014_8_7_scaffold_5303 178_007_scaffold_5303
Species: Clostridium sp. IBUN125C (50%)
2 1238 bp 30.13 7.27 85.78
NECEvent2014_8_7_scaffold_6598 178_007_scaffold_6598
Species: Clostridium butyricum (100%)
1 1033 bp 27.30 7.26 97.58
NECEvent2014_8_7_scaffold_6594 178_007_scaffold_6594
Species: Clostridium sp. IBUN125C (100%)
1 1034 bp 27.56 7.25 99.81
NECEvent2014_8_7_scaffold_1634 178_007_scaffold_1634
Species: Clostridium sp. IBUN125C (50%)
4 3525 bp 26.64 7.23 88.09
NECEvent2014_8_7_scaffold_6408 178_007_scaffold_6408
Species: Clostridium sp. IBUN22A (100%)
1 1059 bp 28.90 7.22 91.78
NECEvent2014_8_7_scaffold_5269 178_007_scaffold_5269
Species: Clostridium sp. IBUN13A (100%)
1 1246 bp 30.50 7.22 99.68
NECEvent2014_8_7_scaffold_3107 178_007_scaffold_3107
Species: Clostridium sp. IBUN125C (100%)
3 1955 bp 29.46 7.21 91.76
NECEvent2014_8_7_scaffold_5255 178_007_scaffold_5255
Species: Clostridium sp. IBUN13A (50%)
2 1248 bp 28.29 7.21 83.65
NECEvent2014_8_7_scaffold_4236 178_007_scaffold_4236
Species: Clostridium sp. IBUN125C (66.67%)
3 1497 bp 27.72 7.21 96.59
NECEvent2014_8_7_scaffold_2198 178_007_scaffold_2198
Species: Clostridium butyricum (50%)
2 2662 bp 30.35 7.21 85.76
NECEvent2014_8_7_scaffold_3833 178_007_scaffold_3833
Species: Clostridium sp. IBUN125C (100%)
2 1624 bp 26.11 7.20 97.72
NECEvent2014_8_7_scaffold_5678 178_007_scaffold_5678
Species: Clostridium sp. IBUN13A (100%)
1 1166 bp 27.44 7.20 90.05
NECEvent2014_8_7_scaffold_5433 178_007_scaffold_5433
Species: Clostridium butyricum (50%)
2 1211 bp 30.88 7.18 99.83
NECEvent2014_8_7_scaffold_3278 178_007_scaffold_3278
Species: Clostridium sp. IBUN125C (100%)
2 1864 bp 27.36 7.16 74.68
NECEvent2014_8_7_scaffold_2972 178_007_scaffold_2972
Species: Clostridium sp. IBUN125C (100%)
3 2017 bp 30.49 7.14 98.46
NECEvent2014_8_7_scaffold_3018 178_007_scaffold_3018
Species: Clostridium sp. IBUN125C (66.67%)
3 1995 bp 26.97 7.14 95.64
NECEvent2014_8_7_scaffold_3900 178_007_scaffold_3900
Species: Clostridium butyricum (100%)
1 1599 bp 28.77 7.13 99.81
NECEvent2014_8_7_scaffold_3779 178_007_scaffold_3779
Species: Clostridium butyricum (100%)
1 1644 bp 30.78 7.12 100.00
NECEvent2014_8_7_scaffold_2143 178_007_scaffold_2143
Species: Clostridium sp. IBUN125C (100%)
3 2741 bp 28.13 7.11 89.86
NECEvent2014_8_7_scaffold_6758 178_007_scaffold_6758
Species: Clostridium butyricum (100%)
1 1012 bp 29.05 7.11 99.90
NECEvent2014_8_7_scaffold_4305 178_007_scaffold_4305
Species: Clostridium sp. IBUN125C (50%)
2 1478 bp 26.52 7.10 97.23
NECEvent2014_8_7_scaffold_2682 178_007_scaffold_2682
Species: Clostridium sp. IBUN125C (66.67%)
3 2204 bp 29.26 7.08 86.43
NECEvent2014_8_7_scaffold_2368 178_007_scaffold_2368
Species: Clostridium sp. IBUN125C (75%)
4 2466 bp 28.75 7.06 94.16
NECEvent2014_8_7_scaffold_5782 178_007_scaffold_5782
Species: Clostridium butyricum (100%)
1 1148 bp 30.49 7.06 99.83
NECEvent2014_8_7_scaffold_4188 178_007_scaffold_4188
Species: Clostridium sp. IBUN125C (100%)
1 1510 bp 29.40 7.05 95.96
NECEvent2014_8_7_scaffold_4177 178_007_scaffold_4177
Species: Clostridium sp. IBUN125C (66.67%)
3 1513 bp 26.97 7.04 89.62
NECEvent2014_8_7_scaffold_3959 178_007_scaffold_3959
Genus: Clostridium (100%)
3 1577 bp 24.54 7.04 88.08
NECEvent2014_8_7_scaffold_3521 178_007_scaffold_3521
Species: Clostridium butyricum (50%)
2 1747 bp 28.85 7.04 93.25
NECEvent2014_8_7_scaffold_3256 178_007_scaffold_3256
Species: Clostridium butyricum (100%)
2 1878 bp 27.10 7.03 88.98
NECEvent2014_8_7_scaffold_6662 178_007_scaffold_6662
Species: Clostridium baratii (100%)
1 1025 bp 29.27 7.02 98.05
NECEvent2014_8_7_scaffold_5736 178_007_scaffold_5736
Species: Clostridium butyricum (100%)
2 1154 bp 28.60 7.02 85.53
NECEvent2014_8_7_scaffold_2874 178_007_scaffold_2874
Species: Clostridium butyricum (100%)
1 2079 bp 27.32 7.00 98.41
NECEvent2014_8_7_scaffold_3931 178_007_scaffold_3931
Species: Clostridium butyricum (66.67%)
3 1585 bp 26.37 7.00 85.36
NECEvent2014_8_7_scaffold_3070 178_007_scaffold_3070
Species: Clostridium butyricum (50%)
4 1977 bp 26.76 6.98 77.54
NECEvent2014_8_7_scaffold_6619 178_007_scaffold_6619
Species: Clostridium sp. IBUN125C (100%)
1 1031 bp 29.00 6.98 92.53
NECEvent2014_8_7_scaffold_6264 178_007_scaffold_6264
Species: Clostridium sp. IBUN13A (50%)
2 1078 bp 28.39 6.96 114.66
NECEvent2014_8_7_scaffold_2239 178_007_scaffold_2239
Species: Clostridium butyricum (100%)
2 2606 bp 27.82 6.96 84.38
NECEvent2014_8_7_scaffold_3293 178_007_scaffold_3293
Species: Clostridium butyricum (66.67%)
3 1856 bp 27.21 6.95 97.95
NECEvent2014_8_7_scaffold_5027 178_007_scaffold_5027
Species: Clostridium butyricum (100%)
1 1298 bp 28.27 6.93 99.85
NECEvent2014_8_7_scaffold_6072 178_007_scaffold_6072
Species: Clostridium butyricum (100%)
1 1105 bp 30.14 6.92 85.79
NECEvent2014_8_7_scaffold_2249 178_007_scaffold_2249
Species: Clostridium sp. IBUN13A (57.14%)
7 2600 bp 26.58 6.92 93.46
NECEvent2014_8_7_scaffold_4460 178_007_scaffold_4460
Species: Clostridium sp. IBUN125C (50%)
2 1432 bp 27.16 6.91 79.40
NECEvent2014_8_7_scaffold_3873 178_007_scaffold_3873
Species: Clostridium butyricum (100%)
2 1609 bp 27.53 6.90 92.11
Displaying items 1051-1100 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.