ggKbase home page

NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1101-1150 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_4435 178_007_scaffold_4435
Species: Clostridium butyricum (100%)
2 1440 bp 27.57 6.88 85.83
NECEvent2014_8_7_scaffold_5357 178_007_scaffold_5357
Species: Clostridium sp. IBUN125C (100%)
1 1227 bp 24.61 6.85 72.13
NECEvent2014_8_7_scaffold_2548 178_007_scaffold_2548
Species: Clostridium butyricum (100%)
4 2305 bp 27.03 6.83 94.10
NECEvent2014_8_7_scaffold_1473 178_007_scaffold_1473
Species: Clostridium sp. IBUN13A (50%)
4 3885 bp 28.78 6.83 85.48
NECEvent2014_8_7_scaffold_4745 178_007_scaffold_4745
Species: Clostridium butyricum (66.67%)
3 1364 bp 30.72 6.82 81.82
NECEvent2014_8_7_scaffold_3313 178_007_scaffold_3313
Species: Clostridium sp. IBUN125C (100%)
2 1849 bp 26.93 6.81 99.13
NECEvent2014_8_7_scaffold_5541 178_007_scaffold_5541
Species: Clostridium sp. IBUN13A (100%)
1 1190 bp 29.08 6.81 92.77
NECEvent2014_8_7_scaffold_5771 178_007_scaffold_5771
Species: Clostridium butyricum (100%)
1 1149 bp 28.20 6.79 95.30
NECEvent2014_8_7_scaffold_4029 178_007_scaffold_4029
Species: Clostridium sp. IBUN125C (50%)
2 1552 bp 31.31 6.77 98.00
NECEvent2014_8_7_scaffold_3273 178_007_scaffold_3273
Species: Clostridium butyricum (50%)
2 1866 bp 26.21 6.75 87.94
NECEvent2014_8_7_scaffold_4488 178_007_scaffold_4488
Species: Clostridium butyricum (100%)
2 1424 bp 24.93 6.74 100.70
NECEvent2014_8_7_scaffold_5697 178_007_scaffold_5697
Species: Clostridium butyricum (100%)
1 1162 bp 25.82 6.71 92.94
NECEvent2014_8_7_scaffold_5992 178_007_scaffold_5992
Species: Clostridium sp. IBUN125C (50%)
2 1117 bp 25.87 6.71 79.77
NECEvent2014_8_7_scaffold_4446 178_007_scaffold_4446
Species: Clostridium butyricum (50%)
2 1436 bp 28.41 6.69 91.92
NECEvent2014_8_7_scaffold_3518 178_007_scaffold_3518
Species: Clostridium sp. IBUN13A (66.67%)
3 1748 bp 27.40 6.69 91.13
NECEvent2014_8_7_scaffold_5949 178_007_scaffold_5949
Species: Clostridium sp. IBUN125C (100%)
1 1123 bp 25.91 6.68 89.49
NECEvent2014_8_7_scaffold_4439 178_007_scaffold_4439
Species: Clostridium butyricum (100%)
1 1438 bp 26.01 6.68 94.71
NECEvent2014_8_7_scaffold_4109 178_007_scaffold_4109
Genus: Clostridium (66.67%)
3 1530 bp 30.07 6.67 99.02
NECEvent2014_8_7_scaffold_6587 178_007_scaffold_6587
Species: Clostridium butyricum (100%)
2 1034 bp 27.66 6.67 78.63
NECEvent2014_8_7_scaffold_6569 178_007_scaffold_6569
Species: Clostridium butyricum (100%)
1 1036 bp 28.19 6.66 97.01
NECEvent2014_8_7_scaffold_4096 178_007_scaffold_4096
Species: Clostridium sp. IBUN125C (50%)
2 1533 bp 27.40 6.65 99.61
NECEvent2014_8_7_scaffold_3841 178_007_scaffold_3841
Species: Clostridium butyricum (100%)
1 1623 bp 27.85 6.65 91.13
NECEvent2014_8_7_scaffold_5923 178_007_scaffold_5923
Species: Clostridium butyricum (100%)
1 1127 bp 27.51 6.65 90.24
NECEvent2014_8_7_scaffold_5190 178_007_scaffold_5190
Species: Clostridium sp. IBUN13A (100%)
2 1263 bp 25.49 6.65 84.56
NECEvent2014_8_7_scaffold_2415 178_007_scaffold_2415
Species: Clostridium butyricum (75%)
4 2412 bp 26.58 6.65 84.70
NECEvent2014_8_7_scaffold_5179 178_007_scaffold_5179
Species: Clostridium butyricum (50%)
2 1265 bp 27.83 6.64 89.88
NECEvent2014_8_7_scaffold_2980 178_007_scaffold_2980
Species: Clostridium sp. IBUN13A (66.67%)
3 2011 bp 28.64 6.64 98.01
NECEvent2014_8_7_scaffold_3926 178_007_scaffold_3926
Genus: Clostridium (100%)
3 1587 bp 27.85 6.62 79.96
NECEvent2014_8_7_scaffold_3371 178_007_scaffold_3371
Species: Clostridium butyricum (50%)
4 1816 bp 26.87 6.61 68.56
NECEvent2014_8_7_scaffold_2158 178_007_scaffold_2158
Genus: Clostridium (80%)
5 2723 bp 28.20 6.61 80.10
NECEvent2014_8_7_scaffold_3016 178_007_scaffold_3016
Species: Clostridium butyricum (100%)
2 1998 bp 30.08 6.61 80.63
NECEvent2014_8_7_scaffold_4844 178_007_scaffold_4844
Species: Clostridium butyricum (100%)
2 1343 bp 26.81 6.59 86.00
NECEvent2014_8_7_scaffold_3187 178_007_scaffold_3187
Species: Clostridium butyricum (100%)
1 1915 bp 24.54 6.58 74.88
NECEvent2014_8_7_scaffold_5825 178_007_scaffold_5825
Species: Clostridium butyricum (50%)
2 1142 bp 30.91 6.57 88.79
NECEvent2014_8_7_scaffold_3954 178_007_scaffold_3954
Species: Clostridium sp. IBUN125C (50%)
2 1579 bp 32.68 6.55 67.26
NECEvent2014_8_7_scaffold_5789 178_007_scaffold_5789
Species: Clostridium butyricum (50%)
2 1147 bp 26.59 6.54 87.88
NECEvent2014_8_7_scaffold_5302 178_007_scaffold_5302
Species: Clostridium butyricum (100%)
1 1238 bp 29.40 6.54 89.42
NECEvent2014_8_7_scaffold_5184 178_007_scaffold_5184
Species: Clostridium sp. IBUN13A (50%)
2 1265 bp 27.59 6.52 92.02
NECEvent2014_8_7_scaffold_5769 178_007_scaffold_5769
Genus: Clostridium (66.67%)
3 1150 bp 27.39 6.52 98.61
NECEvent2014_8_7_scaffold_2453 178_007_scaffold_2453
Species: Clostridium butyricum (66.67%)
3 2375 bp 28.42 6.51 92.08
NECEvent2014_8_7_scaffold_2873 178_007_scaffold_2873
Species: Clostridium sp. IBUN13A (50%)
2 2081 bp 28.93 6.49 89.81
NECEvent2014_8_7_scaffold_2332 178_007_scaffold_2332
Species: Clostridium butyricum (50%)
4 2501 bp 27.83 6.48 77.25
NECEvent2014_8_7_scaffold_6528 178_007_scaffold_6528
Species: Clostridium sp. IBUN22A (66.67%)
3 1043 bp 26.46 6.47 98.08
NECEvent2014_8_7_scaffold_5019 178_007_scaffold_5019
Genus: Clostridium (66.67%)
3 1299 bp 27.87 6.47 88.45
NECEvent2014_8_7_scaffold_5998 178_007_scaffold_5998
Species: Clostridium butyricum (100%)
1 1116 bp 29.93 6.45 92.20
NECEvent2014_8_7_scaffold_1908 178_007_scaffold_1908
Species: Clostridium butyricum (100%)
3 3069 bp 27.01 6.45 89.35
NECEvent2014_8_7_scaffold_6657 178_007_scaffold_6657
Species: Clostridium butyricum (100%)
2 1025 bp 25.46 6.44 81.37
NECEvent2014_8_7_scaffold_4231 178_007_scaffold_4231
Species: Clostridium sp. IBUN125C (100%)
1 1498 bp 28.84 6.41 95.53
NECEvent2014_8_7_scaffold_3268 178_007_scaffold_3268
Species: Clostridium butyricum (100%)
1 1871 bp 30.36 6.41 98.61
NECEvent2014_8_7_scaffold_3910 178_007_scaffold_3910
Species: Clostridium butyricum (50%)
2 1594 bp 26.16 6.40 83.94
Displaying items 1101-1150 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.