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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 251-300 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_4139 178_007_scaffold_4139
Species: Clostridium butyricum (66.67%)
3 1522 bp 26.08 7.79 77.66
NECEvent2014_8_7_scaffold_2404 178_007_scaffold_2404
Species: Clostridium butyricum (100%)
2 2425 bp 29.03 7.79 99.84
NECEvent2014_8_7_scaffold_4479 178_007_scaffold_4479
Species: Clostridium sp. IBUN125C (100%)
2 1425 bp 28.63 7.79 94.11
NECEvent2014_8_7_scaffold_3566 178_007_scaffold_3566
Species: Clostridium sp. IBUN13A (100%)
2 1730 bp 27.57 7.80 87.40
NECEvent2014_8_7_scaffold_5742 178_007_scaffold_5742
Species: Clostridium butyricum (100%)
2 1153 bp 26.80 7.81 78.58
NECEvent2014_8_7_scaffold_6022 178_007_scaffold_6022
Genus: Clostridium (100%)
3 1111 bp 30.42 7.83 87.22
NECEvent2014_8_7_scaffold_5091 178_007_scaffold_5091
Species: Clostridium butyricum (50%)
2 1284 bp 27.10 7.83 83.41
NECEvent2014_8_7_scaffold_5208 178_007_scaffold_5208
Species: Clostridium butyricum (50%)
2 1259 bp 28.28 7.86 104.85
NECEvent2014_8_7_scaffold_4129 178_007_scaffold_4129
Species: Clostridium butyricum (50%)
4 1524 bp 26.57 7.87 88.19
NECEvent2014_8_7_scaffold_3889 178_007_scaffold_3889
Species: Clostridium sp. IBUN125C (100%)
1 1602 bp 28.46 7.87 99.81
NECEvent2014_8_7_scaffold_2796 178_007_scaffold_2796
Species: Clostridium sp. IBUN22A (50%)
2 2129 bp 26.77 7.89 90.75
NECEvent2014_8_7_scaffold_2197 178_007_scaffold_2197
Species: Clostridium butyricum (66.67%)
3 2662 bp 29.53 7.89 93.09
NECEvent2014_8_7_scaffold_2152 178_007_scaffold_2152
Species: Clostridium butyricum (100%)
3 2733 bp 29.86 7.90 89.02
NECEvent2014_8_7_scaffold_2085 178_007_scaffold_2085
Species: Clostridium sp. IBUN125C (50%)
2 2807 bp 28.39 7.91 96.94
NECEvent2014_8_7_scaffold_5237 178_007_scaffold_5237
Species: Clostridium butyricum (100%)
1 1252 bp 25.80 7.91 76.68
NECEvent2014_8_7_scaffold_2434 178_007_scaffold_2434
Species: Clostridium sp. IBUN125C (100%)
1 2390 bp 28.95 7.91 89.87
NECEvent2014_8_7_scaffold_4296 178_007_scaffold_4296
Species: Clostridium butyricum (50%)
4 1479 bp 26.77 7.91 72.41
NECEvent2014_8_7_scaffold_6392 178_007_scaffold_6392
Species: Clostridium sp. IBUN125C (100%)
1 1061 bp 27.99 7.92 93.87
NECEvent2014_8_7_scaffold_5628 178_007_scaffold_5628
Species: Clostridium butyricum (100%)
1 1174 bp 27.09 7.92 99.66
NECEvent2014_8_7_scaffold_4743 178_007_scaffold_4743
Species: Clostridium butyricum (100%)
2 1364 bp 28.96 7.92 95.67
NECEvent2014_8_7_scaffold_2985 178_007_scaffold_2985
Species: Clostridium butyricum (66.67%)
3 2008 bp 28.09 7.92 93.23
NECEvent2014_8_7_scaffold_4023 178_007_scaffold_4023
Species: Clostridium sp. IBUN13A (50%)
2 1554 bp 28.96 7.92 89.58
NECEvent2014_8_7_scaffold_4306 178_007_scaffold_4306
Species: Clostridium butyricum (100%)
1 1478 bp 30.31 7.92 99.86
NECEvent2014_8_7_scaffold_2409 178_007_scaffold_2409
Species: Clostridium butyricum (50%)
2 2420 bp 28.93 7.93 91.98
NECEvent2014_8_7_scaffold_6140 178_007_scaffold_6140
Species: Clostridium butyricum (100%)
2 1096 bp 31.02 7.94 84.85
NECEvent2014_8_7_scaffold_6687 178_007_scaffold_6687
Species: Clostridium butyricum (66.67%)
3 1020 bp 26.57 7.94 65.88
NECEvent2014_8_7_scaffold_3929 178_007_scaffold_3929
Species: Clostridium sp. IBUN125C (50%)
2 1586 bp 26.54 7.94 77.93
NECEvent2014_8_7_scaffold_2052 178_007_scaffold_2052
Species: Clostridium butyricum (75%)
4 2849 bp 28.43 7.95 98.88
NECEvent2014_8_7_scaffold_4773 178_007_scaffold_4773
Species: Clostridium sp. IBUN125C (100%)
1 1358 bp 28.72 7.95 93.45
NECEvent2014_8_7_scaffold_5115 178_007_scaffold_5115
Genus: Clostridium (100%)
3 1278 bp 25.67 7.98 94.13
NECEvent2014_8_7_scaffold_4621 178_007_scaffold_4621
Species: Clostridium butyricum (100%)
1 1391 bp 27.32 7.98 82.39
NECEvent2014_8_7_scaffold_3253 178_007_scaffold_3253
Species: Clostridium butyricum (100%)
1 1879 bp 28.15 7.98 95.48
NECEvent2014_8_7_scaffold_3394 178_007_scaffold_3394
Species: Clostridium butyricum (66.67%)
3 1802 bp 28.36 7.99 99.06
NECEvent2014_8_7_scaffold_6603 178_007_scaffold_6603
Species: Clostridium sp. IBUN13A (50%)
2 1033 bp 28.56 7.99 101.07
NECEvent2014_8_7_scaffold_4068 178_007_scaffold_4068
Species: Clostridium butyricum (66.67%)
3 1540 bp 28.31 7.99 97.79
NECEvent2014_8_7_scaffold_6197 178_007_scaffold_6197
Species: Clostridium sp. IBUN22A (100%)
1 1088 bp 31.80 8.00 99.82
NECEvent2014_8_7_scaffold_4973 178_007_scaffold_4973
Species: Clostridium butyricum (100%)
1 1312 bp 30.87 8.00 98.55
NECEvent2014_8_7_scaffold_1514 178_007_scaffold_1514
Genus: Clostridium (80%)
5 3802 bp 31.22 8.01 99.74
NECEvent2014_8_7_scaffold_6766 178_007_scaffold_6766
Species: Clostridium sp. IBUN13A (50%)
2 1011 bp 27.99 8.01 98.52
NECEvent2014_8_7_scaffold_4492 178_007_scaffold_4492
Species: Clostridium butyricum (100%)
2 1423 bp 26.49 8.01 92.76
NECEvent2014_8_7_scaffold_5318 178_007_scaffold_5318
Species: Clostridium butyricum (100%)
2 1235 bp 29.39 8.02 94.25
NECEvent2014_8_7_scaffold_2795 178_007_scaffold_2795
Species: Clostridium butyricum (100%)
3 2130 bp 27.51 8.03 93.38
NECEvent2014_8_7_scaffold_2969 178_007_scaffold_2969
Species: Clostridium butyricum (50%)
2 2018 bp 31.02 8.03 100.20
NECEvent2014_8_7_scaffold_2305 178_007_scaffold_2305
Species: Clostridium butyricum (100%)
4 2538 bp 30.42 8.04 91.61
NECEvent2014_8_7_scaffold_4105 178_007_scaffold_4105
Species: Clostridium butyricum (50%)
4 1530 bp 25.82 8.04 75.29
NECEvent2014_8_7_scaffold_4110 178_007_scaffold_4110
Species: Clostridium butyricum (100%)
2 1530 bp 27.19 8.04 96.08
NECEvent2014_8_7_scaffold_5734 178_007_scaffold_5734
Species: Clostridium butyricum (50%)
2 1154 bp 29.55 8.06 94.11
NECEvent2014_8_7_scaffold_3713 178_007_scaffold_3713
Species: Clostridium butyricum (100%)
1 1674 bp 27.66 8.06 90.50
NECEvent2014_8_7_scaffold_2241 178_007_scaffold_2241
Species: Clostridium sp. IBUN125C (50%)
2 2604 bp 25.96 8.06 90.09
NECEvent2014_8_7_scaffold_2414 178_007_scaffold_2414
Species: Clostridium butyricum (100%)
2 2417 bp 29.42 8.07 77.58
Displaying items 251-300 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.