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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 301-350 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_4010 178_007_scaffold_4010
Species: Clostridium botulinum (50%)
4 1559 bp 28.03 8.08 49.45
NECEvent2014_8_7_scaffold_3758 178_007_scaffold_3758
Species: Clostridium sp. IBUN125C (100%)
1 1653 bp 29.28 8.08 94.56
NECEvent2014_8_7_scaffold_2557 178_007_scaffold_2557
Species: Clostridium butyricum (100%)
4 2298 bp 28.89 8.09 85.64
NECEvent2014_8_7_scaffold_4555 178_007_scaffold_4555
Species: Clostridium sp. IBUN125C (50%)
2 1410 bp 28.58 8.09 89.36
NECEvent2014_8_7_scaffold_3536 178_007_scaffold_3536
Species: Clostridium sp. IBUN125C (50%)
2 1743 bp 28.17 8.09 86.75
NECEvent2014_8_7_scaffold_6028 178_007_scaffold_6028
Species: Clostridium butyricum (100%)
1 1110 bp 25.95 8.11 90.81
NECEvent2014_8_7_scaffold_3465 178_007_scaffold_3465
Species: Clostridium butyricum (50%)
2 1774 bp 28.41 8.12 90.98
NECEvent2014_8_7_scaffold_5404 178_007_scaffold_5404
Species: Clostridium sp. IBUN125C (50%)
2 1216 bp 28.29 8.14 90.54
NECEvent2014_8_7_scaffold_5149 178_007_scaffold_5149
Species: Clostridium butyricum (100%)
2 1272 bp 29.80 8.14 83.25
NECEvent2014_8_7_scaffold_3210 178_007_scaffold_3210
Species: Clostridium sp. IBUN13A (50%)
2 1899 bp 28.17 8.14 93.05
NECEvent2014_8_7_scaffold_3661 178_007_scaffold_3661
Species: Clostridium butyricum (66.67%)
3 1694 bp 29.28 8.15 83.77
NECEvent2014_8_7_scaffold_6749 178_007_scaffold_6749
Species: Clostridium sp. IBUN125C (100%)
1 1012 bp 28.56 8.15 91.30
NECEvent2014_8_7_scaffold_6644 178_007_scaffold_6644
Species: human gut metagenome (100%)
2 1028 bp 25.88 8.17 81.42
NECEvent2014_8_7_scaffold_2070 178_007_scaffold_2070
Species: Clostridium butyricum (75%)
4 2827 bp 27.98 8.17 91.16
NECEvent2014_8_7_scaffold_2566 178_007_scaffold_2566
Species: Clostridium butyricum (50%)
2 2292 bp 27.97 8.18 81.15
NECEvent2014_8_7_scaffold_3403 178_007_scaffold_3403
Species: Clostridium sp. IBUN13A (100%)
2 1797 bp 26.66 8.18 89.15
NECEvent2014_8_7_scaffold_4705 178_007_scaffold_4705
Species: Clostridium butyricum (100%)
1 1372 bp 29.45 8.20 82.87
NECEvent2014_8_7_scaffold_1970 178_007_scaffold_1970
Species: Clostridium sp. IBUN13A (66.67%)
3 2964 bp 27.16 8.20 94.33
NECEvent2014_8_7_scaffold_3825 178_007_scaffold_3825
Species: Clostridium butyricum (100%)
1 1627 bp 25.69 8.21 96.80
NECEvent2014_8_7_scaffold_3106 178_007_scaffold_3106
Species: Clostridium sp. IBUN125C (100%)
1 1956 bp 29.96 8.21 99.85
NECEvent2014_8_7_scaffold_3778 178_007_scaffold_3778
Species: Clostridium butyricum (100%)
3 1645 bp 26.99 8.21 87.36
NECEvent2014_8_7_scaffold_5467 178_007_scaffold_5467
Species: Clostridium butyricum (100%)
1 1204 bp 28.24 8.22 95.18
NECEvent2014_8_7_scaffold_2921 178_007_scaffold_2921
Species: Clostridium sp. IBUN125C (50%)
2 2043 bp 27.85 8.22 91.92
NECEvent2014_8_7_scaffold_3618 178_007_scaffold_3618
Species: Clostridium butyricum (50%)
2 1712 bp 29.38 8.24 44.51
NECEvent2014_8_7_scaffold_3519 178_007_scaffold_3519
Species: Clostridium butyricum (100%)
3 1748 bp 28.60 8.24 96.28
NECEvent2014_8_7_scaffold_3225 178_007_scaffold_3225
Species: Clostridium butyricum (100%)
1 1890 bp 29.63 8.25 99.84
NECEvent2014_8_7_scaffold_4270 178_007_scaffold_4270
Species: Clostridium butyricum (100%)
2 1486 bp 28.94 8.28 91.25
NECEvent2014_8_7_scaffold_2536 178_007_scaffold_2536
Species: Clostridium sp. IBUN125C (66.67%)
3 2316 bp 29.32 8.29 93.01
NECEvent2014_8_7_scaffold_4548 178_007_scaffold_4548
Species: Clostridium sp. IBUN13A (100%)
1 1411 bp 26.51 8.29 99.93
NECEvent2014_8_7_scaffold_3920 178_007_scaffold_3920
Species: Clostridium sp. IBUN125C (50%)
2 1588 bp 29.03 8.31 97.48
NECEvent2014_8_7_scaffold_1734 178_007_scaffold_1734
Genus: Clostridium (66.67%)
3 3322 bp 33.23 8.31 91.57
NECEvent2014_8_7_scaffold_4708 178_007_scaffold_4708
Species: Clostridium butyricum (100%)
1 1371 bp 31.15 8.32 100.00
NECEvent2014_8_7_scaffold_4298 178_007_scaffold_4298
Species: Clostridium butyricum (100%)
4 1479 bp 25.42 8.32 101.01
NECEvent2014_8_7_scaffold_3668 178_007_scaffold_3668
Species: Clostridium sp. IBUN13A (66.67%)
3 1693 bp 28.94 8.33 77.26
NECEvent2014_8_7_scaffold_6791 178_007_scaffold_6791
Species: Clostridium sp. IBUN22A (100%)
2 1007 bp 26.81 8.34 67.03
NECEvent2014_8_7_scaffold_1455 178_007_scaffold_1455
Species: Clostridium butyricum (100%)
3 3915 bp 29.60 8.35 96.40
NECEvent2014_8_7_scaffold_2817 178_007_scaffold_2817
Species: Clostridium butyricum (75%)
4 2118 bp 26.96 8.36 61.47
NECEvent2014_8_7_scaffold_3344 178_007_scaffold_3344
Species: Clostridium butyricum (100%)
2 1830 bp 30.55 8.36 89.34
NECEvent2014_8_7_scaffold_6161 178_007_scaffold_6161
Species: Clostridium sp. IBUN125C (100%)
2 1093 bp 25.98 8.37 62.85
NECEvent2014_8_7_scaffold_6042 178_007_scaffold_6042
Species: Clostridium sp. IBUN125C (100%)
1 1108 bp 31.05 8.39 99.91
NECEvent2014_8_7_scaffold_2235 178_007_scaffold_2235
Species: Clostridium butyricum (80%)
5 2610 bp 28.51 8.39 85.63
NECEvent2014_8_7_scaffold_3512 178_007_scaffold_3512
Species: Clostridium sp. IBUN13A (50%)
2 1750 bp 29.14 8.40 100.29
NECEvent2014_8_7_scaffold_1795 178_007_scaffold_1795
Species: Clostridium butyricum (66.67%)
3 3206 bp 29.44 8.42 84.78
NECEvent2014_8_7_scaffold_5846 178_007_scaffold_5846
Species: Clostridium sp. IBUN125C (50%)
2 1139 bp 28.18 8.43 63.21
NECEvent2014_8_7_scaffold_2916 178_007_scaffold_2916
Species: Clostridium sp. IBUN13A (66.67%)
3 2043 bp 26.48 8.44 87.08
NECEvent2014_8_7_scaffold_5856 178_007_scaffold_5856
Species: Clostridium butyricum (50%)
2 1137 bp 30.52 8.44 104.49
NECEvent2014_8_7_scaffold_3909 178_007_scaffold_3909
Species: Clostridium butyricum (100%)
1 1595 bp 26.96 8.46 99.87
NECEvent2014_8_7_scaffold_5128 178_007_scaffold_5128
Species: Clostridium sp. IBUN125C (100%)
1 1275 bp 28.86 8.47 81.65
NECEvent2014_8_7_scaffold_2122 178_007_scaffold_2122
Species: Clostridium butyricum (50%)
2 2760 bp 26.99 8.48 71.30
NECEvent2014_8_7_scaffold_3966 178_007_scaffold_3966
Species: Clostridium butyricum (100%)
1 1574 bp 26.75 8.48 74.52
Displaying items 301-350 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.