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NECEvent2014_8_7_scaffold_363_17

Organism: NECEvent2014_8_7_Clostridium_perfringens_32_6_partial

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 7435..7974

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=10 Tax=Clostridium perfringens RepID=RL6_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 7.60e-93
  • rbh
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 2.10e-93
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 1.10e-92

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGTCAAGAGTAGGTAAAATGCCTATAGCTATCCCTGCTGGAGTAACTGTTACTGTAACACCAGAGAACGTTGTTACAGTAAAAGGCCCTAAGGGTGAGTTAGTTAAAGCTATGCACAAAGACATTAATATAGCTGTAGAAGATGCTCAAGTAGTTGTTACTAGACCAAGTGACGTTAAAGAACACAGAGCACTTCACGGATTAACTAGAGCTTTACTTAACAACATGGTTGTTGGAGTAAGCCAAGGTTTTTCAAAAACTTTAGAGTTAAACGGAGTTGGATACAGAGCTCAATTACAAGGAAAGAAACTTGTTATGAACTTAGGATATTCACATCCAGTAGAAGTTGAAGCAGTTGATGGAGTAGACTTCAAATTAGACGGAACAACTAAAGTTATCGTTGAAGGTATCGATAAAGAAAAAGTTGGAGCAGTTGCTGCTAACATCAGATCATGGAGAAAACCTGAACCATACAAAGGTAAAGGAATCAAGTACTCTGATGAAGTTATAAGAAGAAAAGAAGGTAAAACTGGTAAATAA
PROTEIN sequence
Length: 180
MSRVGKMPIAIPAGVTVTVTPENVVTVKGPKGELVKAMHKDINIAVEDAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYKGKGIKYSDEVIRRKEGKTGK*