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NECEvent2014_8_7_scaffold_363

Alias: 178_007_scaffold_363

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_7_scaffold_363_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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211..519
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=5 Tax=Clostridium perfringens RepID=RS10_CLOP1
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_7_scaffold_363_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


602..1231
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=4 Tax=Clostridium perfringens RepID=RL3_CLOP1 rbh
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_8_7_scaffold_363_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1256..1870
DNA (615bp) protein (205aa)
50S ribosomal protein L4 n=8 Tax=Clostridium perfringens RepID=RL4_CLOP1 rbh
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
NECEvent2014_8_7_scaffold_363_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1870..2163
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=11 Tax=Clostridium perfringens RepID=RL23_CLOP1
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_7_scaffold_363_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2218..3051
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=10 Tax=Clostridium perfringens RepID=RL2_CLOP1 rbh
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_8_7_scaffold_363_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3122..3403
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=11 Tax=Clostridium perfringens RepID=RS19_CLOP1
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
NECEvent2014_8_7_scaffold_363_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3431..3766
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=11 Tax=Clostridium perfringens RepID=RL22_CLOP1
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_7_scaffold_363_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3787..4455
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=11 Tax=Clostridium perfringens RepID=RS3_CLOP1 rbh
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_8_7_scaffold_363_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4486..4920
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=11 Tax=Clostridium perfringens RepID=RL16_CLOP1
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_7_scaffold_363_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4920..5129
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=11 Tax=Clostridium perfringens RepID=RL29_CLOP1
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
NECEvent2014_8_7_scaffold_363_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5151..5405
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=10 Tax=Clostridium perfringens RepID=RS17_CLOP1
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_7_scaffold_363_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5436..5804
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=11 Tax=Clostridium perfringens RepID=RL14_CLOP1
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_7_scaffold_363_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5828..6142
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=10 Tax=Clostridium perfringens RepID=RL24_CLOP1
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE s
NECEvent2014_8_7_scaffold_363_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6165..6704
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=11 Tax=Clostridium perfringens RepID=RL5_CLOP1 rbh
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_7_scaffold_363_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6721..6906
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=8 Tax=Clostridium perfringens RepID=RS14Z_CLOP1
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000255|HAMAP-Rule:MF_01364}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_8_7_scaffold_363_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6940..7338
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=11 Tax=Clostridium perfringens RepID=RS8_CLOP1
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_8_7_scaffold_363_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7435..7974
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=10 Tax=Clostridium perfringens RepID=RL6_CLOP1 rbh
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_8_7_scaffold_363_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8005..8364
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=11 Tax=Clostridium perfringens RepID=RL18_CLOP1
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE s
NECEvent2014_8_7_scaffold_363_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8385..8882
DNA (498bp) protein (166aa)
30S ribosomal protein S5 n=11 Tax=Clostridium perfringens RepID=RS5_CLOP1 rbh
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_7_scaffold_363_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8894..9067
DNA (174bp) protein (58aa)
50S ribosomal protein L30 n=11 Tax=Clostridium perfringens RepID=RL30_CLOP1
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_7_scaffold_363_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9101..9541
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=11 Tax=Clostridium perfringens RepID=RL15_CLOP1
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_7_scaffold_363_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9544..10821
DNA (1278bp) protein (426aa)
Protein translocase subunit SecY n=3 Tax=Clostridium perfringens RepID=B1BMJ8_CLOPF rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
secY; preprotein translocase subunit SecY
NECEvent2014_8_7_scaffold_363_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10848..11498
DNA (651bp) protein (217aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
Adenylate kinase n=10 Tax=Clostridium perfringens RepID=KAD_CLOP1 rbh
NECEvent2014_8_7_scaffold_363_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11498..12007
DNA (510bp) protein (170aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=11 Tax=Clostridium perfringens RepID=MAP1_CLOPE
Displaying 24 items

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