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NECEvent2014_8_7_scaffold_1

Alias: 178_007_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_7_scaffold_1_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(106..594)
DNA (489bp) protein (163aa)
Ecotin n=221 Tax=Escherichia RepID=ECOT_ECO8A rbh
ecotin (serine protease inhibitor)
Ecotin {ECO:0000256|HAMAP-Rule:MF_00706, ECO:0000256|SAAS:SAAS00013245}; Flags: Precursor;; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_8_7_scaffold_1_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(729..893)
DNA (165bp) protein (55aa)
Uncharacterized protein YojO n=108 Tax=Escherichia RepID=YOJO_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK14231.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_7_scaffold_1_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1002..1496
DNA (495bp) protein (165aa)
Ferredoxin-type protein NapF n=966 Tax=Enterobacteriaceae RepID=NAPF_ECO57 rbh
napF; ferredoxin-type protein
Ferredoxin-type protein NapF {ECO:0000313|EMBL:KEJ46490.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_8_7_scaffold_1_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1486..1749
DNA (264bp) protein (88aa)
napD; assembly protein for periplasmic nitrate reductase (EC:1.7.99.4)
Protein NapD n=1009 Tax=Enterobacteriaceae RepID=NAPD_ECO57
NapD family protein {ECO:0000313|EMBL:EMX86614.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_7_scaffold_1_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1746..4232
DNA (2487bp) protein (829aa)
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=1444279 spec
Periplasmic nitrate reductase n=111 Tax=Gammaproteobacteria RepID=NAPA_ECOBW rbh
napA; nitrate reductase catalytic subunit
NECEvent2014_8_7_scaffold_1_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4239..4934
DNA (696bp) protein (232aa)
Ferredoxin-type protein NapG n=1096 Tax=Enterobacteriaceae RepID=NAPG_ECOL6 rbh
methylamine utilization ferredoxin-type protein MauM
Ferredoxin {ECO:0000313|EMBL:EQQ07859.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4
NECEvent2014_8_7_scaffold_1_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4921..5784
DNA (864bp) protein (288aa)
Ferredoxin-type protein NapH n=490 Tax=cellular organisms RepID=NAPH_ECOLI rbh
napH; quinol dehydrogenase membrane component
Ferredoxin-type , NapH/MauN family protein {ECO:0000313|EMBL:EMX31029.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_8_7_scaffold_1_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5781..6230
DNA (450bp) protein (150aa)
Periplasmic nitrate reductase, electron transfer subunit n=833 Tax=Enterobacteriaceae RepID=NAPB_ECOLI rbh
napB; citrate reductase cytochrome c-type subunit
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; TaxID=1169355 species="Bacteria; Proteobacteria; Gam
NECEvent2014_8_7_scaffold_1_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6240..6842
DNA (603bp) protein (201aa)
Cytochrome c-type protein NapC n=1279 Tax=Enterobacteriaceae RepID=NAPC_ECO57 rbh
napC; cytochrome c-type protein napC
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_7_scaffold_1_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6861..7478
DNA (618bp) protein (206aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Cytochrome C biogenesis protein CcmA n=1 Tax=Escherichia coli LAU-EC7 RepID=V8LCL2_ECOLX rbh
cytochrome C biogenesis protein CcmA
NECEvent2014_8_7_scaffold_1_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7475..8137
DNA (663bp) protein (221aa)
Heme exporter protein B n=1164 Tax=Enterobacteriaceae RepID=CCMB_ECO57 rbh
ccmB; heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1248823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_7_scaffold_1_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8179..8916
DNA (738bp) protein (246aa)
Heme exporter protein C n=1371 Tax=Enterobacteriaceae RepID=CCMC_ECO57 rbh
ccmC; heme exporter protein CcmC rbh
Heme exporter protein C {ECO:0000313|EMBL:EOV61166.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_7_scaffold_1_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8913..9122
DNA (210bp) protein (70aa)
Heme exporter protein D n=1376 Tax=Enterobacteriaceae RepID=CCMD_ECO57
ccmD; heme exporter protein CcmD
Heme exporter protein CcmD {ECO:0000313|EMBL:EHU42437.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_7_scaffold_1_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9119..9598
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1370 Tax=Enterobacteriaceae RepID=CCME_ECO24 rbh
ccmE; periplasmic heme chaperone
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
NECEvent2014_8_7_scaffold_1_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9595..11538
DNA (1944bp) protein (648aa)
Cytochrome c-type biogenesis protein CcmF n=294 Tax=Enterobacteriaceae RepID=CCMF_ECOLI rbh
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:ENA31221.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
ccmF; heme lyase, CcmF subunit
NECEvent2014_8_7_scaffold_1_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11535..12092
DNA (558bp) protein (186aa)
Thiol:disulfide interchange protein DsbE n=1308 Tax=Enterobacteriaceae RepID=DSBE_ECO57 rbh
dsbE; thiol:disulfide interchange protein DsbE
Thiol:disulfide interchange protein DsbE {ECO:0000313|EMBL:EZA30328.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_8_7_scaffold_1_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12089..13141
DNA (1053bp) protein (351aa)
Cytochrome c-type biogenesis protein CcmH n=238 Tax=Enterobacteriaceae RepID=CCMH_ECOLI rbh
ccmH; heme lyase subunit
Cytochrome c-type biogenesis protein CcmH {ECO:0000313|EMBL:EKI52081.1}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_8_7_scaffold_1_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13352..13999)
DNA (648bp) protein (216aa)
Nitrate/nitrite response regulator (Sensor NarQ) n=732 Tax=Enterobacteriaceae RepID=J7QTA7_ECOLX rbh
narP; transcriptional regulator NarP
Transcriptional regulator NarP {ECO:0000313|EMBL:KDV31137.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_8_7_scaffold_1_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14319..14789
DNA (471bp) protein (157aa)
Putative aTP-binding component of a transport system n=2 Tax=Escherichia coli RepID=M9BBB5_ECOLX rbh
hypothetical protein
Adhesin/invasin TibA autotransporter domain protein {ECO:0000313|EMBL:EHV56774.1}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
NECEvent2014_8_7_scaffold_1_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14737..16911
DNA (2175bp) protein (725aa)
Predicted autotransporter outer membrane protein n=13 Tax=Escherichia coli RepID=B1X887_ECODH rbh
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KDY68399.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
yejO; pertactin
NECEvent2014_8_7_scaffold_1_trna_1
unknown

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comp(17017..17090)
DNA (74bp)
transferRNA
NECEvent2014_8_7_scaffold_1_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17165..18925)
DNA (1761bp) protein (587aa)
Inner membrane protein YejM n=841 Tax=Escherichia RepID=YEJM_ECO57 rbh
Inner membrane protein yejM {ECO:0000313|EMBL:KDY68400.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
yejM; putative hydrolase, inner membrane
NECEvent2014_8_7_scaffold_1_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18945..19172)
DNA (228bp) protein (76aa)
UPF0352 protein YejL n=1208 Tax=Enterobacteriaceae RepID=YEJL_ECO55
hypothetical protein
UPF0352 protein YejL {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_7_scaffold_1_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19354..20361
DNA (1008bp) protein (336aa)
Nucleoid-associated protein YejK n=163 Tax=Enterobacteriaceae RepID=NDPA_ECOBW rbh
yejK; nucleoid-associated protein NdpA
Nucleoid-associated protein YejK {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_8_7_scaffold_1_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20500..20784)
DNA (285bp) protein (95aa)
50S ribosomal protein L25 n=1 Tax=Shigella flexneri serotype 5b (strain 8401) RepID=Q0T2T6_SHIF8
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_8_7_scaffold_1_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20909..22669)
DNA (1761bp) protein (587aa)
Uncharacterized protein YejH n=86 Tax=Escherichia coli RepID=YEJH_ECOLI rbh
Predicted ATP-dependet helicase {ECO:0000313|EMBL:CDP70775.1}; Putative ATP-dependent DNA or RNA helicase {ECO:0000313|EMBL:AKF56030.1}; Type III restriction enzyme, res subunit {ECO:0000313|EMBL:CEE0
putative helicase
NECEvent2014_8_7_scaffold_1_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22818..23513
DNA (696bp) protein (232aa)
rsuA; 16s rRNA pseudouridylate synthase A (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Pseudouridine synthase n=7 Tax=Enterobacteriaceae RepID=D2AEZ4_SHIF2 rbh
NECEvent2014_8_7_scaffold_1_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23541..24731
DNA (1191bp) protein (397aa)
Bicyclomycin resistance protein n=291 Tax=Enterobacteriaceae RepID=BCR_ECOLI rbh
bcr; bicyclomycin/multidrug efflux system
Bicyclomycin resistance protein {ECO:0000313|EMBL:KDU33089.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_8_7_scaffold_1_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25064..25408
DNA (345bp) protein (115aa)
Uncharacterized protein YejG n=1090 Tax=Enterobacteriaceae RepID=YEJG_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP64061.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_7_scaffold_1_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25412..27001)
DNA (1590bp) protein (530aa)
Nickel import ATP-binding protein NikE {ECO:0000313|EMBL:KEO23301.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KEO23301.1};; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
Uncharacterized ABC transporter ATP-binding protein YejF n=134 Tax=Escherichia RepID=YEJF_ECOLI rbh
ABC transporter rbh
Displaying items 1-30 of 213 in total

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