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NECEvent2014_8_7_scaffold_34_10

Organism: NECEvent2014_8_7_Escherichia_coli_49_99_partial

partial RP 24 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(8339..8794)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1448 Tax=Enterobacteriaceae RepID=DKSA_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 151.0
  • Bit_score: 305
  • Evalue 2.80e-80
  • rbh
dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 151.0
  • Bit_score: 305
  • Evalue 7.90e-81
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 151.0
  • Bit_score: 305
  • Evalue 3.90e-80

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCAAGAAGGGCAAAACCGTAAAACATCGTCCCTGAGTATTCTCGCCATCGCTGGGGTGGAACCATATCAGGAGAAGCCGGGCGAAGAGTATATGAATGAAGCCCAGCTGGCGCACTTCCGTCGTATTCTGGAAGCATGGCGTAATCAACTCAGGGATGAAGTCGATCGCACCGTTACACATATGCAGGATGAAGCAGCCAACTTCCCGGACCCGGTAGACCGTGCAGCCCAGGAAGAAGAGTTCAGCCTCGAACTGCGTAACCGCGATCGCGAGCGTAAGCTGATCAAAAAGATCGAGAAGACGCTGAAAAAAGTGGAAGACGAAGATTTCGGCTACTGCGAATCCTGCGGTGTTGAAATTGGTATTCGCCGTCTGGAAGCGCGCCCGACAGCCGATCTGTGCATCGACTGCAAAACGCTGGCTGAAATTCGCGAAAAACAGATGGCTGGCTAA
PROTEIN sequence
Length: 152
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG*