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NECEvent2014_8_7_scaffold_34

Alias: 178_007_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_7_scaffold_34_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..423)
DNA (423bp) protein (141aa)
Fimbrial protein YadL n=1 Tax=Escherichia coli KTE64 RepID=S1CBA8_ECOLX
yadL; putative fimbrial-like adhesin protein
Fimbrial protein {ECO:0000313|EMBL:EII45169.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.39
NECEvent2014_8_7_scaffold_34_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(435..1004)
DNA (570bp) protein (190aa)
Uncharacterized protein YadM n=74 Tax=Escherichia RepID=YADM_ECOLI rbh
yadM; fimbrial-like adhesin protein
Fimbrial-like adhesin protein {ECO:0000313|EMBL:ELC12451.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_7_scaffold_34_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1021..1575)
DNA (555bp) protein (185aa)
Outer membrane usher protein htrE n=1 Tax=Escherichia coli HVH 164 (4-5953081) RepID=T7JXK2_ECOLX
htrE; putative outer membrane usher protein
Outer membrane usher protein HtrE (Heat shock protein E) {ECO:0000313|EMBL:EGI12546.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_8_7_scaffold_34_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1568..3616)
DNA (2049bp) protein (683aa)
Putative fimbrial outer membrane usher protein n=1 Tax=Escherichia coli O32:H37 str. P4 RepID=I2I3H9_ECOLX rbh
htrE; predicted outer membrane usher protein
Outer membrane usher protein HtrE {ECO:0000313|EMBL:EII45195.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_8_7_scaffold_34_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3651..4391)
DNA (741bp) protein (247aa)
Chaperone protein EcpD n=86 Tax=Escherichia RepID=ECPD_ECOLI rbh
ecpD; predicted periplasmic pilin chaperone rbh
Gram-negative pili assembly chaperone, C-terminal domain protein {ECO:0000313|EMBL:KDU31598.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
NECEvent2014_8_7_scaffold_34_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4489..5073)
DNA (585bp) protein (195aa)
Uncharacterized fimbrial-like protein YadN n=502 Tax=Enterobacteriaceae RepID=YADN_ECOLI rbh
yadN; fimbrial-like protein
Fimbrial family protein {ECO:0000313|EMBL:EGW99010.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_7_scaffold_34_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5443..5922)
DNA (480bp) protein (160aa)
2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase {ECO:0000313|EMBL:AJF54919.1}; EC=2.7.6.3 {ECO:0000313|EMBL:AJF54919.1};; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteo
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=108 Tax=Escherichia RepID=HPPK_ECOLI rbh
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NECEvent2014_8_7_scaffold_34_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5919..7283)
DNA (1365bp) protein (455aa)
pcnB; poly(A) polymerase I (EC:2.7.7.19)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=595495 species="Bacteria; Proteobacteria;
Poly(A) polymerase I n=824 Tax=Enterobacteriaceae RepID=C3TQ02_ECOLX rbh
NECEvent2014_8_7_scaffold_34_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7376..8302)
DNA (927bp) protein (309aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
Glutamyl-Q tRNA(Asp) synthetase n=200 Tax=Escherichia RepID=GLUQ_ECOBW rbh
yadB; glutamyl-Q tRNA(Asp) synthetase
NECEvent2014_8_7_scaffold_34_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8339..8794)
DNA (456bp) protein (152aa)
RNA polymerase-binding transcription factor DksA n=1448 Tax=Enterobacteriaceae RepID=DKSA_ECO57 rbh
dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_8_7_scaffold_34_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8972..9676)
DNA (705bp) protein (235aa)
Sugar fermentation stimulation protein A n=762 Tax=Enterobacteriaceae RepID=SFSA_ECO24 rbh
DNA-binding transcriptional regulator
Sugar fermentation stimulation protein A {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_8_7_scaffold_34_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9691..10221)
DNA (531bp) protein (177aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1268997 species="B
Uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=J7QM32_ECOLX rbh
2'-5' RNA ligase rbh
NECEvent2014_8_7_scaffold_34_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10295..12724
DNA (2430bp) protein (810aa)
ATP-dependent helicase HrpB n=41 Tax=Escherichia RepID=H4UE23_ECOLX rbh
ATP-dependent helicase HrpB {ECO:0000313|EMBL:EII45147.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
ATP-dependent helicase
NECEvent2014_8_7_scaffold_34_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12920..15454
DNA (2535bp) protein (845aa)
penicillin-binding protein 1B (EC:2.4.1.129) rbh
Penicillin-binding protein 1B n=114 Tax=Escherichia RepID=PBPB_ECOLI rbh
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR00
NECEvent2014_8_7_scaffold_34_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15674..17917
DNA (2244bp) protein (748aa)
Ferrichrome-iron receptor n=299 Tax=Enterobacteriaceae RepID=FHUA_ECOLI rbh
Ferrichrome-iron receptor FhuA {ECO:0000313|EMBL:ESD78546.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
ferrichrome outer membrane transporter
NECEvent2014_8_7_scaffold_34_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17968..18765
DNA (798bp) protein (266aa)
Iron(3+)-hydroxamate import ATP-binding protein FhuC {ECO:0000313|EMBL:KDY65507.1}; EC=3.6.3.34 {ECO:0000313|EMBL:KDY65507.1};; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
Iron(3+)-hydroxamate import ATP-binding protein FhuC n=159 Tax=Escherichia RepID=FHUC_ECOLI rbh
ABC transporter
NECEvent2014_8_7_scaffold_34_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18765..19655
DNA (891bp) protein (297aa)
Iron(3+)-hydroxamate-binding protein FhuD n=113 Tax=Enterobacteriaceae RepID=FHUD_ECOLI rbh
fhuD; iron-hydroxamate transporter substrate-binding subunit
Ferrichrome-binding periplasmic protein FhuD {ECO:0000313|EMBL:EGI12560.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_8_7_scaffold_34_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19652..21634
DNA (1983bp) protein (661aa)
Iron(3+)-hydroxamate import system permease protein FhuB n=13 Tax=Enterobacteriaceae RepID=FHUB_ECOLI rbh
Iron(3+)-hydroxamate import ABC transporter permease {ECO:0000313|EMBL:AKF54116.1}; Iron(3+)-hydroxamate import system permease protein fhuB {ECO:0000313|EMBL:CEE06898.1}; TaxID=562 species="Bacteria;
fhuB; iron-hydroxamate transporter permease subunit
NECEvent2014_8_7_scaffold_34_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21792..23072)
DNA (1281bp) protein (427aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde 2,1-aminomutase n=155 Tax=Escherichia coli RepID=GSA_ECOSM rbh
NECEvent2014_8_7_scaffold_34_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23297..24718
DNA (1422bp) protein (474aa)
H(+)/Cl(-) exchange transporter ClcA n=533 Tax=Enterobacteriaceae RepID=CLCA_ECO24 rbh
clcA; chloride channel protein
H(+)/Cl(-) exchange transporter ClcA {ECO:0000256|HAMAP-Rule:MF_01128, ECO:0000256|SAAS:SAAS00010065}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
NECEvent2014_8_7_scaffold_34_21
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24800..25144
DNA (345bp) protein (115aa)
Iron-sulfur cluster insertion protein ErpA n=1446 Tax=Enterobacteriaceae RepID=ERPA_ECO24
erpA; iron-sulfur cluster insertion protein ErpA
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_8_7_scaffold_34_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25191..25814)
DNA (624bp) protein (208aa)
UPF0126 inner membrane protein YadS n=1137 Tax=Enterobacteriaceae RepID=YADS_ECOL6 rbh
yadS; putative membrane protein YadS
Uncharacterized protein {ECO:0000313|EMBL:EFU34928.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_7_scaffold_34_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25852..26652)
DNA (801bp) protein (267aa)
Vitamin B12-binding protein n=683 Tax=Enterobacteriaceae RepID=BTUF_ECOLI rbh
vitamin B12-binding protein
Vitamin B12-binding protein {ECO:0000256|HAMAP-Rule:MF_01000}; Flags: Precursor;; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_8_7_scaffold_34_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26645..27343)
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1205 Tax=Enterobacteriaceae RepID=MTNN_ECO24 rbh
mtnN; MTA/SAH nucleosidase MtnN
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035261}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {
NECEvent2014_8_7_scaffold_34_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27427..28944
DNA (1518bp) protein (506aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase n=303 Tax=Enterobacteriaceae RepID=DGTP_ECO7I rbh
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030}; Short=dGTP triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030};; Short=dGTPase {ECO:0000256|HAMAP-Rule:MF_00030};; E
NECEvent2014_8_7_scaffold_34_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29074..30498
DNA (1425bp) protein (475aa)
Peptidase Do {ECO:0000313|EMBL:EFK52471.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFK52471.1};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
Periplasmic serine endoprotease DegP n=589 Tax=Enterobacteriaceae RepID=DEGP_ECO57 rbh
degP; serine endoprotease
NECEvent2014_8_7_scaffold_34_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30653..31810
DNA (1158bp) protein (386aa)
Carbohydrate diacid regulator n=114 Tax=Escherichia RepID=CDAR_ECOLI rbh
transcriptional regulator CdaR
Carbohydrate diacid regulator {ECO:0000313|EMBL:KDX19674.1}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_7_scaffold_34_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31899..32285)
DNA (387bp) protein (129aa)
UPF0325 protein YaeH n=1417 Tax=Enterobacteriaceae RepID=YAEH_ECO24
hypothetical protein
UPF0325 protein YaeH {ECO:0000256|HAMAP-Rule:MF_01519}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_7_scaffold_34_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32447..33259)
DNA (813bp) protein (271aa)
Phosphodiesterase YaeI n=111 Tax=Escherichia RepID=YAEI_ECOLI rbh
putative phosphodiesterase rbh
Phosphodiesterase yaeI {ECO:0000313|EMBL:EIF87400.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_8_7_scaffold_34_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33313..34137)
DNA (825bp) protein (275aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAA
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=617 Tax=Enterobacteriaceae RepID=DAPD_ECO24 rbh
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
Displaying items 1-30 of 48 in total

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