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NECEvent2014_8_7_scaffold_43_22

Organism: NECEvent2014_8_7_Escherichia_coli_49_99_partial

partial RP 24 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 20158..20562

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein StpA n=978 Tax=Enterobacteriaceae RepID=STPA_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 264
  • Evalue 4.90e-68
histone family protein nucleoid-structuring protein H-NS similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 264
  • Evalue 1.40e-68
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 264
  • Evalue 6.80e-68

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGTCCGTAATGTTACAAAGTTTAAATAACATTCGCACCCTCCGTGCGATGGCTCGCGAATTCTCCATTGACGTTCTTGAAGAAATGCTCGAAAAATTCAGGGTTGTCACTAAAGAAAGACGTGAAGAAGAAGAACAGCAGCAGCGTGAACTGGCAGAGCGCCAGGAAAAAATTAGCACCTGGCTGGAGCTGATGAAAGCTGACGGAATTAACCCGGAAGAGTTATTGGGTAATAGCTCTGCTGCTGCACCACGCGCTGGTAAAAAACGCCAGCCGCGTCCGGCGAAATATAAATTCACCGATGTTAACGGTGAAACTAAAACCTGGACCGGTCAGGGCCGTACACCGAAGCCAATTGCTCAGGCGCTGGCAGAAGGTAAATCTCTCGACGATTTCCTGATCTAA
PROTEIN sequence
Length: 135
MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI*