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NECEvent2014_9_1_scaffold_46

Alias: 182_001_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_9_1_scaffold_46_1
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(51..413)
DNA (363bp) protein (121aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcu
mRNA interferase MazF n=54 Tax=Staphylococcus epidermidis RepID=MAZF_STAEQ
Programmed cell death toxin YdcE
NECEvent2014_9_1_scaffold_46_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(410..580)
DNA (171bp) protein (57aa)
Antitoxin MazE n=81 Tax=Staphylococcus epidermidis RepID=MAZE_STAEQ
Programmed cell death antitoxin YdcD
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE60121.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
NECEvent2014_9_1_scaffold_46_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(667..1815)
DNA (1149bp) protein (383aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=525375 species="Bacteria; Firmicu
Alanine racemase n=10 Tax=Staphylococcus epidermidis RepID=F3TRK0_STAEP rbh
NECEvent2014_9_1_scaffold_46_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1879..2232)
DNA (354bp) protein (118aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
Holo-[acyl-carrier protein] synthase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=21 Tax=Staphylococcus epidermidis RepID=C5QD13_STAEP
NECEvent2014_9_1_scaffold_46_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2280..2789)
DNA (510bp) protein (170aa)
Uncharacterized protein n=17 Tax=Staphylococcus epidermidis RepID=C5QD12_STAEP rbh
Hypothetical protein, ydbS homolog
Uncharacterized protein {ECO:0000313|EMBL:EFE60124.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_46_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2776..4287)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=18 Tax=Staphylococcus epidermidis RepID=C5QD11_STAEP rbh
Hypothetical protein, ydbT homolog
Uncharacterized protein {ECO:0000313|EMBL:EFE60125.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_46_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4274..4753)
DNA (480bp) protein (160aa)
Uncharacterized protein n=21 Tax=Staphylococcus epidermidis RepID=C5QD10_STAEP rbh
Hypothetical protein SAV2074
Uncharacterized protein {ECO:0000313|EMBL:EFE60126.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_46_8
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5002..6213)
DNA (1212bp) protein (404aa)
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyloco
DEAD/DEAH box helicase n=1 Tax=Staphylococcus epidermidis BCM-HMP0060 RepID=C5QD09_STAEP rbh
Cold-shock DEAD-box protein A
NECEvent2014_9_1_scaffold_46_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6235..6531)
DNA (297bp) protein (99aa)
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococ
DEAD/DEAH box helicase n=1 Tax=Staphylococcus epidermidis VCU065 RepID=H3USX8_STAEP
DEAD-box ATP dependent DNA helicase
NECEvent2014_9_1_scaffold_46_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6830..8185)
DNA (1356bp) protein (452aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillal
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopim elate--D-alanyl-D-alanyl ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=16 Tax=Staphylococcus epidermidis RepID=D1WP88_STAEP rbh
NECEvent2014_9_1_scaffold_46_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8197..9270)
DNA (1074bp) protein (358aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=24 Tax=Staphylococcus RepID=DDL_STAEQ rbh
NECEvent2014_9_1_scaffold_46_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9661..10872
DNA (1212bp) protein (404aa)
Cell cycle protein FtsW n=20 Tax=Staphylococcus epidermidis RepID=K1UP13_STAEP rbh
Cell division protein FtsW
Cell division protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:AAW55061.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (stra
NECEvent2014_9_1_scaffold_46_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10972..11109)
DNA (138bp) protein (46aa)
Uncharacterized protein n=66 Tax=Staphylococcus epidermidis RepID=Q5HMD6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV20206.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_9_1_scaffold_46_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11252..11461)
DNA (210bp) protein (70aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=Q5HMD5_STAEQ
Hypothetical protein SAV2086
Uncharacterized protein {ECO:0000313|EMBL:AAW55063.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_9_1_scaffold_46_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11468..11761)
DNA (294bp) protein (98aa)
Uncharacterized protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HMD4_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW55064.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_9_1_scaffold_46_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11935..13419
DNA (1485bp) protein (495aa)
Cardiolipin synthetase (EC:2.7.8.-)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=525375 species="Bacteria; Firmicutes;
Cardiolipin synthase n=8 Tax=Staphylococcus epidermidis RepID=C5QD03_STAEP rbh
NECEvent2014_9_1_scaffold_46_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13601..14254
DNA (654bp) protein (218aa)
HD domain protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HMD2_STAEQ rbh
metal-dependent phosphohydrolase
HD domain protein {ECO:0000313|EMBL:AAW55066.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_9_1_scaffold_46_18
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14360..15277)
DNA (918bp) protein (306aa)
Membrane protein insertase YidC n=7 Tax=Staphylococcus epidermidis RepID=C5QD01_STAEP rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01811}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01811}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01811}; Membrane protein YidC {ECO
OxaI/YidC membrane insertion protein
NECEvent2014_9_1_scaffold_46_19
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15321..15968)
DNA (648bp) protein (216aa)
Thiamin-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Staphylococcus epidermidis NIHLM040 RepID=J0ZJM9_STAEP rbh
NECEvent2014_9_1_scaffold_46_20
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15965..16756)
DNA (792bp) protein (264aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
Hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=32 Tax=Staphylococcus epidermidis RepID=THIM_STAEQ rbh
NECEvent2014_9_1_scaffold_46_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16746..17597)
DNA (852bp) protein (284aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EFE60139.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EFE60139.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Stap
Phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=22 Tax=Staphylococcus epidermidis RepID=C5QTN3_STAEP rbh
NECEvent2014_9_1_scaffold_46_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17560..18249)
DNA (690bp) protein (230aa)
Putative thiaminase-2 n=46 Tax=Staphylococcus epidermidis RepID=TENA_STAEQ rbh
TenA family transcription regulator
Uncharacterized protein {ECO:0000313|EMBL:ETJ12884.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_9_1_scaffold_46_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18534..19193)
DNA (660bp) protein (220aa)
Putative transglycosylase SceD {ECO:0000313|EMBL:EFE60141.1}; EC=3.2.-.- {ECO:0000313|EMBL:EFE60141.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Stap
Probable transglycosylase SceD n=51 Tax=Staphylococcus epidermidis RepID=SCED_STAEQ rbh
SceD-like transglycosylase, biomarker for vancomycin-intermediate strains
NECEvent2014_9_1_scaffold_46_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19581..19976)
DNA (396bp) protein (132aa)
Single-stranded DNA-binding protein n=40 Tax=Staphylococcus epidermidis RepID=SSB_STAES
single strand DNA binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli;
NECEvent2014_9_1_scaffold_46_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20167..20607
DNA (441bp) protein (147aa)
YwpF protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HMC4_STAEQ
ywpF; hypothetical protein
YwpF protein {ECO:0000313|EMBL:AAW55082.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_9_1_scaffold_46_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20925..21362)
DNA (438bp) protein (146aa)
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=54 Tax=Staphylococcus epidermidis RepID=FABZ_STAEQ
NECEvent2014_9_1_scaffold_46_27
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21396..22661)
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 n=41 Tax=Staphylococcus epidermidis RepID=MURA1_STAEQ rbh
NECEvent2014_9_1_scaffold_46_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22771..23004)
DNA (234bp) protein (78aa)
Uncharacterized protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HMC1_STAEQ
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EFE60146.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_46_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23153..23557)
DNA (405bp) protein (135aa)
atpC; ATP synthase F1, epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=58 Tax=Staphylococcus epidermidis RepID=ATPE_STAES
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
NECEvent2014_9_1_scaffold_46_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23577..24989)
DNA (1413bp) protein (471aa)
atpD; ATP synthase F1, beta subunit (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=54 Tax=Staphylococcus epidermidis RepID=ATPB_STAEQ rbh
Displaying items 1-30 of 88 in total

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