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NECEvent2014_9_1_scaffold_125

Alias: 182_001_scaffold_125

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_9_1_scaffold_125_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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128..2263
DNA (2136bp) protein (712aa)
DNA topoisomerase 3 {ECO:0000255|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000255|HAMAP-Rule:MF_00953};; DNA topoisomerase III {ECO:0000255|HAMAP-Rule:MF_00953}; TaxID=176280 species="Bacteria; Firmicut
topB; DNA topoisomerase III family protein (EC:5.99.1.2)
DNA topoisomerase 3 n=8 Tax=Staphylococcus epidermidis RepID=H3V2J4_STAEP rbh
NECEvent2014_9_1_scaffold_125_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2376..3710
DNA (1335bp) protein (445aa)
Guanine/hypoxanthine permease PbuG n=18 Tax=Staphylococcus epidermidis RepID=F3SVH7_STAEP rbh
pbuG; guanine/hypoxanthine permease pbuG
Putative permease {ECO:0000313|EMBL:EFE57810.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_125_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3767..4165)
DNA (399bp) protein (133aa)
Uncharacterized protein n=9 Tax=Staphylococcus epidermidis RepID=H3V2J6_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES34890.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Hypothetical protein SAV2252
NECEvent2014_9_1_scaffold_125_4

Not on your lists


4521..4829
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=29 Tax=Staphylococcus RepID=C5QCK3_STAEP
30S ribosomal protein S10 {ECO:0000313|EMBL:ETJ21609.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpsJ; 30S ribosomal protein S10
NECEvent2014_9_1_scaffold_125_5

Not on your lists


4857..5519
DNA (663bp) protein (221aa)
50S ribosomal protein L3 n=53 Tax=Staphylococcus epidermidis RepID=C5QCK4_STAEP rbh
LSU ribosomal protein L3p (L3e)
50S ribosomal protein L3 {ECO:0000313|EMBL:ETJ21610.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_125_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5548..6171
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=13 Tax=Staphylococcus epidermidis RepID=D0FH59_STAEP rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
LSU ribosomal protein L4p (L1e)
NECEvent2014_9_1_scaffold_125_7
Staphylococcus massiliensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


6171..6446
DNA (276bp) protein (92aa)
50S ribosomal protein L23 n=79 Tax=Staphylococcus RepID=RL23_STAEQ
LSU ribosomal protein L23p (L23Ae)
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1229783 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus massiliensis S46.;"
NECEvent2014_9_1_scaffold_125_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


6475..7308
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=9 Tax=Staphylococcus epidermidis RepID=H3V2K1_STAEP rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
LSU ribosomal protein L2p (L8e)
NECEvent2014_9_1_scaffold_125_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


7375..7653
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=84 Tax=Staphylococcus RepID=RS19_STAEQ
rpsS; ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=904802 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CO-98.;"
NECEvent2014_9_1_scaffold_125_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


7681..8034
DNA (354bp) protein (118aa)
50S ribosomal protein L22 n=87 Tax=Staphylococcus RepID=RL22_STAEQ
LSU ribosomal protein L22p (L17e)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
NECEvent2014_9_1_scaffold_125_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


8058..8711
DNA (654bp) protein (218aa)
30S ribosomal protein S3 n=81 Tax=Staphylococcus epidermidis RepID=RS3_STAEQ rbh
SSU ribosomal protein S3p (S3e)
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / R
NECEvent2014_9_1_scaffold_125_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


8714..9148
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=77 Tax=Staphylococcus epidermidis RepID=RL16_STAEQ
LSU ribosomal protein L16p (L10e)
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
NECEvent2014_9_1_scaffold_125_13
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9138..9347
DNA (210bp) protein (70aa)
50S ribosomal protein L29, partial n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI00035D4F81
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
NECEvent2014_9_1_scaffold_125_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9372..9635
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=48 Tax=Staphylococcus RepID=RS17_STACT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
rpsQ; 30S ribosomal protein S17
NECEvent2014_9_1_scaffold_125_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9666..10034
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=81 Tax=Staphylococcus epidermidis RepID=RL14_STAEQ
LSU ribosomal protein L14p (L23e)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus e
NECEvent2014_9_1_scaffold_125_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10076..10393
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=9 Tax=Staphylococcus epidermidis RepID=H3V2K9_STAEP
LSU ribosomal protein L24p (L26e)
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
NECEvent2014_9_1_scaffold_125_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10419..10958
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=71 Tax=Staphylococcus epidermidis RepID=RL5_STAEQ rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
LSU ribosomal protein L5p (L11e)
NECEvent2014_9_1_scaffold_125_18
Staphylococcus caprae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10981..11166
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=78 Tax=Staphylococcus RepID=RS14Z_STAEQ
SSU ribosomal protein S14p (S29e)
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=525378 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloco
NECEvent2014_9_1_scaffold_125_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


11197..11595
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=80 Tax=Staphylococcus epidermidis RepID=RS8_STAEQ
SSU ribosomal protein S8p (S15Ae)
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
NECEvent2014_9_1_scaffold_125_20

Not on your lists


11620..12156
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=79 Tax=Staphylococcus epidermidis RepID=RL6_STAEQ rbh
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000313|EMBL:ETJ21625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_125_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


12188..12550
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=10 Tax=Staphylococcus epidermidis RepID=H3V2L4_STAEP
LSU ribosomal protein L18p (L5e)
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_125_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


12571..13071
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=77 Tax=Staphylococcus epidermidis RepID=RS5_STAEQ rbh
SSU ribosomal protein S5p (S2e)
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
NECEvent2014_9_1_scaffold_125_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


13088..13267
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=48 Tax=Staphylococcus RepID=RL30_STAES
LSU ribosomal protein L30p (L7e)
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
NECEvent2014_9_1_scaffold_125_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


13284..13724
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=70 Tax=Staphylococcus RepID=RL15_STAES
rplO; ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
NECEvent2014_9_1_scaffold_125_25

Not on your lists


13724..15016
DNA (1293bp) protein (431aa)
Protein translocase subunit SecY n=51 Tax=Staphylococcus epidermidis RepID=SECY_STAEQ rbh
Preprotein translocase secY subunit (TC 3.A.5.1.1)
Protein translocase subunit SecY {ECO:0000313|EMBL:ETJ21630.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_125_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15034..15681
DNA (648bp) protein (216aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
Adenylate kinase n=13 Tax=Staphylococcus epidermidis RepID=H3V2L9_STAEP rbh
NECEvent2014_9_1_scaffold_125_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15869..16087
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=98 Tax=Staphylococcus RepID=IF1_STAEQ
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(gr
NECEvent2014_9_1_scaffold_125_28
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16119..16232
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=92 Tax=Staphylococcus RepID=RL36_STAEQ
rpmJ; ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lu
NECEvent2014_9_1_scaffold_125_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


16255..16620
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=81 Tax=Staphylococcus epidermidis RepID=RS13_STAEQ
SSU ribosomal protein S13p (S18e)
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_9_1_scaffold_125_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


16643..17032
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=68 Tax=Staphylococcus epidermidis RepID=RS11_STAEQ
SSU ribosomal protein S11p (S14e)
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
Displaying items 1-30 of 55 in total

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