ggKbase home page

Infant_2_FM_6

Alias: i3.NODE_211_length_119418_cov_85.909935

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_FM_6_1
unknown

Not on your lists

comp(90..194)
DNA (105bp) protein (35aa)
0
Infant_2_FM_6_2
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(256..1632)
DNA (1377bp) protein (459aa)
MATE efflux family protein {ECO:0000313|EMBL:EFI41811.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon
MATE efflux family protein n=5 Tax=Firmicutes RepID=D7N8P2_9FIRM
MATE family transporter
Infant_2_FM_6_3
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1634..4114)
DNA (2481bp) protein (827aa)
Pyruvate phosphate dikinase, PEP/pyruvate-binding domain protein {ECO:0000313|EMBL:ETK00224.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incer
Phosphoenolpyruvate synthase n=4 Tax=Firmicutes RepID=E0QKG4_9FIRM
phosphoenolpyruvate synthase
Infant_2_FM_6_4
Streptococcus dysgalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4138..4734)
DNA (597bp) protein (199aa)
TetR family transcriptional regulator {ECO:0000313|EMBL:KKC21803.1}; TaxID=119602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus dysg
Transcriptional regulator, TetR family n=7 Tax=Firmicutes RepID=D1VU42_9FIRM
TetR family transcriptional regulator
Infant_2_FM_6_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4861..6702)
DNA (1842bp) protein (614aa)
Putative TnpX site-specific recombinase {ECO:0000313|EMBL:EGS35037.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna S
Site-specific DNA recombinase n=13 Tax=Firmicutes RepID=B0S209_FINM2
site-specific DNA recombinase
Infant_2_FM_6_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6742..7794)
DNA (1053bp) protein (351aa)
TraG family protein {ECO:0000313|EMBL:EFL55158.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
putative plasmid transfer factor
Plasmid transfer factor n=13 Tax=Firmicutes RepID=C2BHR0_9FIRM
Infant_2_FM_6_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7787..8521)
DNA (735bp) protein (245aa)
Antirepressor {ECO:0000313|EMBL:KGF11436.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;
putative phage-associated antirepressor
Phage antirepressor protein n=31 Tax=Bacteria RepID=Q1J4V4_STRPF
Infant_2_FM_6_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8515..9003)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:EFL54217.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
hypothetical protein
Uncharacterized protein n=30 Tax=Bacteria RepID=K1LUZ5_9LACT
Infant_2_FM_6_9
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8996..9823)
DNA (828bp) protein (276aa)
DNA replication protein {ECO:0000313|EMBL:CEO64970.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
nucleoside triphosphate hydrolase
DNA replication protein n=30 Tax=Bacteria RepID=B0S213_FINM2
Infant_2_FM_6_10
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9811..10593)
DNA (783bp) protein (261aa)
Replication initiator protein A domain protein {ECO:0000313|EMBL:EFK38556.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptonip
Phage protein n=22 Tax=Bacteria RepID=B3XSR1_UREUR
hypothetical protein
Infant_2_FM_6_11
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10678..10959)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:EFH92747.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
Uncharacterized protein n=5 Tax=Firmicutes RepID=K1M8R9_9LACT
hypothetical protein
Infant_2_FM_6_12
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11023..12933)
DNA (1911bp) protein (637aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysyl-tRNA synthetase class II
Lysine--tRNA ligase n=6 Tax=Finegoldia magna RepID=B0S215_FINM2
Infant_2_FM_6_13
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12936..13415)
DNA (480bp) protein (160aa)
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=525282 species="Bacteria
transcription elongation factor
Transcription elongation factor GreA n=5 Tax=Finegoldia magna RepID=GREA_FINM2
Infant_2_FM_6_14
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13499..14431)
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Fine
tRNA-dihydrouridine synthase n=5 Tax=Finegoldia magna RepID=D6SBA0_PEPMA
nitrogen regulation protein
Infant_2_FM_6_15
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14424..15212)
DNA (789bp) protein (263aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=5 Tax=Finegoldia magna RepID=COAX_FINM2
Baf family transcriptional regulator
Infant_2_FM_6_16
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15218..16816)
DNA (1599bp) protein (533aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
pyrG; CTP synthetase
CTP synthase n=5 Tax=Finegoldia magna RepID=E1KZ14_PEPMA
Infant_2_FM_6_17
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16831..18885)
DNA (2055bp) protein (685aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EFH92753.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EFH92753.1};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
Glutamine synthase type III n=5 Tax=Finegoldia magna RepID=B0S220_FINM2
glutamine synthase type III
Infant_2_FM_6_18
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19000..19464)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:EFH92754.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
Putative uncharacterized protein n=5 Tax=Finegoldia magna RepID=D9PQY6_PEPMA
Infant_2_FM_6_19
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19464..21377)
DNA (1914bp) protein (638aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pepton
ATP-dependent zinc metalloprotease FtsH n=5 Tax=Finegoldia magna RepID=D6SBA5_PEPMA
ATP-dependent zinc metallopeptidase
Infant_2_FM_6_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21377..21937)
DNA (561bp) protein (187aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EXF26629.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna A
hypoxanthine-guanine phosphoribosyltransferase
Hypoxanthine phosphoribosyltransferase n=5 Tax=Finegoldia magna RepID=E1KZ18_PEPMA
Infant_2_FM_6_21
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21927..23282)
DNA (1356bp) protein (452aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SBA7_PEPMA
cell cycle protein
Infant_2_FM_6_22
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23320..23742)
DNA (423bp) protein (141aa)
S1 RNA binding domain protein {ECO:0000313|EMBL:EFH92758.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.
polyribonucleotide nucleotidyltransferase
S1 RNA binding domain protein n=5 Tax=Finegoldia magna RepID=D9PQZ0_PEPMA
Infant_2_FM_6_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23811..24185)
DNA (375bp) protein (125aa)
Putative cell division protein FtsL {ECO:0000313|EMBL:EFK93960.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-1
Septum formation initiator n=5 Tax=Finegoldia magna RepID=E1KZ21_PEPMA
hypothetical protein
Infant_2_FM_6_24
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24187..24432)
DNA (246bp) protein (82aa)
S4 RNA-binding domain-containing protein
RNA-binding protein S4 {ECO:0000313|EMBL:EXF26633.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
S4 RNA-binding domain protein n=5 Tax=Finegoldia magna RepID=D6SBB0_PEPMA
Infant_2_FM_6_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24419..25309)
DNA (891bp) protein (297aa)
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EFH92761.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC
hydrolase
Hydrolase n=5 Tax=Finegoldia magna RepID=B0S228_FINM2
Infant_2_FM_6_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25344..27101)
DNA (1758bp) protein (586aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" so
Pyruvate kinase n=5 Tax=Finegoldia magna RepID=B0S229_FINM2
pyruvate kinase
Infant_2_FM_6_27
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27114..28073)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase
6-phosphofructokinase n=5 Tax=Finegoldia magna RepID=K6PF_FINM2
Infant_2_FM_6_28
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28083..31568)
DNA (3486bp) protein (1162aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Fineg
DNA polymerase III alpha subunit n=5 Tax=Finegoldia magna RepID=B0S231_FINM2
DNA polymerase III subunit alpha
Infant_2_FM_6_29
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31633..32550)
DNA (918bp) protein (306aa)
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilac
hypothetical protein
Putative sporulation transcription regulator WhiA n=5 Tax=Finegoldia magna RepID=D9PQZ7_PEPMA
Infant_2_FM_6_30
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32555..32959)
DNA (405bp) protein (135aa)
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFH92766.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
NUDIX hydrolase n=5 Tax=Finegoldia magna RepID=D6SBB6_PEPMA
hypothetical protein
Displaying items 1-30 of 116 in total

View Taxonomy