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Infant_2_PA_4

Alias: i3.NODE_5_length_88280_cov_58.227242

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Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_PA_4_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..774
DNA (774bp) protein (258aa)
fimbrial protein
Type 4 fimbrial biogenesis outer membrane protein {ECO:0000313|EMBL:BAQ42889.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou
Fimbrial assembly protein PilQ n=26 Tax=Pseudomonas RepID=PILQ_PSEAE
Infant_2_PA_4_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

786..1304
DNA (519bp) protein (173aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1415629 species="Bacteria; Proteobacteria; Gammap
Shikimate kinase n=24 Tax=Pseudomonas RepID=AROK_PSEA7
Infant_2_PA_4_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1354..2460
DNA (1107bp) protein (369aa)
aroB; 3-dehydroquinate synthase
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacte
3-dehydroquinate synthase n=24 Tax=Pseudomonas RepID=AROB_PSEA7
Infant_2_PA_4_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2467..4128
DNA (1662bp) protein (554aa)
Uncharacterized protein n=30 Tax=Pseudomonas RepID=K0XWC8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:BAQ42886.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
hypothetical protein
Infant_2_PA_4_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4353..8798
DNA (4446bp) protein (1482aa)
gltB; glutamate synthase subunit alpha (EC:1.4.1.13)
Glutamate synthase large chain {ECO:0000313|EMBL:AAG08421.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
Glutamate synthase large subunit n=25 Tax=Pseudomonas RepID=P95456_PSEAI
Infant_2_PA_4_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8827..10260
DNA (1434bp) protein (478aa)
Glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase subunit beta {ECO:0000313|EMBL:AHB58727.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
Glutamate synthase small chain n=59 Tax=Pseudomonadaceae RepID=E3A0Z2_PSEAI
Infant_2_PA_4_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10435..11502
DNA (1068bp) protein (356aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=66 Tax=Pseudomonadaceae RepID=DCUP_PSEA7
Infant_2_PA_4_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11623..12603)
DNA (981bp) protein (327aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR70498.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
Uncharacterized protein n=23 Tax=Pseudomonas RepID=G2U7E1_PSEAI
Infant_2_PA_4_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12677..13750)
DNA (1074bp) protein (358aa)
putative transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAR70497.1}; Transcriptional regulator {ECO:0000313|EMBL:AKE72723.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomo
Transcriptional regulator n=23 Tax=Pseudomonas RepID=F5K7D1_PSEAI
Infant_2_PA_4_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13862..14791
DNA (930bp) protein (310aa)
short-chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAR70496.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
Short chain dehydrogenase n=24 Tax=Pseudomonas RepID=F5K7D0_PSEAI
Infant_2_PA_4_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14819..16135)
DNA (1317bp) protein (439aa)
Permeases of the major facilitator superfamily
MFS family transporter {ECO:0000313|EMBL:ETU87184.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
Major facilitator family transporter n=24 Tax=Pseudomonas RepID=A6VDF1_PSEA7
Infant_2_PA_4_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16311..17216
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=24 Tax=Pseudomonas RepID=G4LF43_PSEAI
LysR family transcriptional regulator YnfL
Probable transcriptional regulator {ECO:0000313|EMBL:AAG08414.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
Infant_2_PA_4_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17307..18074
DNA (768bp) protein (256aa)
cobyric acid synthase
Cobyric acid synthase {ECO:0000313|EMBL:EVT88142.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin
Uncharacterized protein n=24 Tax=Pseudomonas RepID=J6M249_PSEAI
Infant_2_PA_4_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18096..18911)
DNA (816bp) protein (272aa)
universal stress protein
Uncharacterized protein {ECO:0000313|EMBL:CDH80092.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Uncharacterized protein n=24 Tax=Pseudomonas RepID=J7DAS4_PSEAI
Infant_2_PA_4_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19024..19476)
DNA (453bp) protein (151aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU87180.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Uncharacterized protein n=25 Tax=Pseudomonas RepID=G2U7E8_PSEAI
Infant_2_PA_4_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19567..20844)
DNA (1278bp) protein (426aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AHW73767.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
Homocysteine synthase n=25 Tax=Pseudomonas RepID=B7V3B8_PSEA8
Infant_2_PA_4_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20965..21939)
DNA (975bp) protein (325aa)
ytnM; hypothetical protein
Membrane protein {ECO:0000313|EMBL:ETD53968.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa V
Membrane protein, putative n=13 Tax=Pseudomonas RepID=A6VDE5_PSEA7
Infant_2_PA_4_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22090..23550)
DNA (1461bp) protein (487aa)
Selenoprotein O and cysteine-containing-like protein
UPF0061 protein ERS445055_05353 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
UPF0061 protein PA5023 n=26 Tax=Pseudomonas RepID=Y5023_PSEAE
Infant_2_PA_4_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23617..26973)
DNA (3357bp) protein (1119aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG08407.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
Membrane protein, putative n=26 Tax=Pseudomonas RepID=A6VDE3_PSEA7
Infant_2_PA_4_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27065..28807)
DNA (1743bp) protein (581aa)
Cell volume regulation protein A homolog {ECO:0000313|EMBL:CEI13109.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
Na(+)/H(+) antiporter
Cell volume regulation protein A homolog n=24 Tax=Pseudomonas RepID=CVRA_PSEA7
Infant_2_PA_4_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29100..30902)
DNA (1803bp) protein (601aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAR70484.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
Acyl-CoA dehydrogenase domain-containing protein n=27 Tax=Pseudomonas RepID=F5KM70_PSEAI
Acyl-CoA dehydrogenase
Infant_2_PA_4_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31204..32040
DNA (837bp) protein (279aa)
hypothetical protein
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
Uncharacterized protein n=23 Tax=Pseudomonas RepID=G2U7F6_PSEAI
Infant_2_PA_4_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32044..32691)
DNA (648bp) protein (216aa)
peptide methionine sulfoxide reductase
Peptide methionine sulfoxide reductase MsrA {ECO:0000313|EMBL:BAR70482.1}; EC=1.8.4.11 {ECO:0000313|EMBL:BAR70482.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales
Peptide methionine sulfoxide reductase MsrA n=24 Tax=Pseudomonas RepID=MSRA_PSEA8
Infant_2_PA_4_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32785..35484)
DNA (2700bp) protein (900aa)
putative sensory box protein
Diguanylate cyclase {ECO:0000313|EMBL:AKE72708.1}; Sensory box/GGDEF family protein {ECO:0000313|EMBL:BAR70481.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Ps
PA5017-like protein n=25 Tax=Pseudomonas RepID=Q1AHB3_PSEAI
Infant_2_PA_4_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35902..37545)
DNA (1644bp) protein (548aa)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=27 Tax=Pseudomonas RepID=ODP2_PSEAE
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaprote
aceF; dihydrolipoamide acetyltransferase
Infant_2_PA_4_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37690..40338)
DNA (2649bp) protein (883aa)
Pyruvate dehydrogenase E1 component n=24 Tax=Pseudomonas RepID=ODP1_PSEAE
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
aceE; pyruvate dehydrogenase
Infant_2_PA_4_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40620..43568
DNA (2949bp) protein (983aa)
Glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-
Glutamate-ammonia-ligase adenylyltransferase n=25 Tax=Pseudomonas RepID=GLNE_PSEAE
Infant_2_PA_4_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43624..44547
DNA (924bp) protein (308aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:CDH80077.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDH80077.1};; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonada
Branched-chain-amino-acid aminotransferase n=29 Tax=Pseudomonas RepID=ILVE_PSEAE
Infant_2_PA_4_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44607..45644
DNA (1038bp) protein (346aa)
ADP-heptose--LPS heptosyltransferase
ADP-heptose-LPS heptosyltransferase 2 {ECO:0000313|EMBL:CDH80076.1}; EC=2.-.-.- {ECO:0000313|EMBL:CDH80076.1};; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; P
Heptosyltransferase II n=23 Tax=Pseudomonas RepID=A3L2N9_PSEAI
Infant_2_PA_4_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45641..46708
DNA (1068bp) protein (356aa)
waaC; lipopolysaccharide heptosyltransferase I
Heptosyltransferase I {ECO:0000313|EMBL:AAG08396.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
Heptosyltransferase I n=24 Tax=Pseudomonas RepID=A3LJB3_PSEAI
Displaying items 1-30 of 65 in total

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