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Infant_2_PA_18

Alias: i3.NODE_210_length_214615_cov_49.823429

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Displaying items 1-30 of 204 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_PA_18_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198..1427
DNA (1230bp) protein (410aa)
sbcD; exonuclease SbcD rbh
Exonuclease SbcD {ECO:0000313|EMBL:CEI16996.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Exonuclease SbcD n=25 Tax=Pseudomonas RepID=B7UZ60_PSEA8
Infant_2_PA_18_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1436..5071
DNA (3636bp) protein (1212aa)
nuclease SbcCD subunit C
Nuclease sbcCD subunit C {ECO:0000313|EMBL:ETU92206.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru
Nuclease SbcCD subunit C n=22 Tax=Pseudomonas RepID=SBCC_PSEAE
Infant_2_PA_18_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5093..7258)
DNA (2166bp) protein (722aa)
recD; exodeoxyribonuclease V subunit alpha
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V alpha chain n=24 Tax=Pseudomonas RepID=B7UZ62_PSEA8
Infant_2_PA_18_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7255..8136)
DNA (882bp) protein (294aa)
recB; exodeoxyribonuclease V subunit beta
Exodeoxyribonuclease V beta chain {ECO:0000313|EMBL:BAR69588.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
Exodeoxyribonuclease V beta chain n=24 Tax=Pseudomonas RepID=B7UZ63_PSEA8
Infant_2_PA_18_5
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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8781..10052
DNA (1272bp) protein (424aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB66211.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TPE2_RICCO
Infant_2_PA_18_6
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10059..10913
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI73641.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
0
Infant_2_PA_18_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11021..14536)
DNA (3516bp) protein (1172aa)
Exodeoxyribonuclease V gamma chain n=25 Tax=Pseudomonas RepID=B7UZ64_PSEA8
exodeoxyribonuclease V subunit gamma
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
Infant_2_PA_18_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14577..15260)
DNA (684bp) protein (228aa)
Lipoate-protein ligase A
Lipoate--protein ligase {ECO:0000313|EMBL:AKE71712.1}; Lipoate-protein ligase A {ECO:0000313|EMBL:BAR69590.1}; Putative lipoate-protein ligase {ECO:0000313|EMBL:CKI07322.1}; EC=2.3.1.- {ECO:0000313|EM
Uncharacterized protein n=22 Tax=Pseudomonas RepID=I6RR71_PSEAI
Infant_2_PA_18_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15373..16263)
DNA (891bp) protein (297aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV72332.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Membrane protein, putative n=24 Tax=Pseudomonas RepID=A6VAV5_PSEA7
Infant_2_PA_18_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16364..17167
DNA (804bp) protein (268aa)
Transcriptional regulator, AraC family
Probable transcriptional regulator {ECO:0000313|EMBL:AAG07676.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
AraC family transcriptional regulator n=25 Tax=Pseudomonas RepID=F5KLT7_PSEAI
Infant_2_PA_18_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17222..18427
DNA (1206bp) protein (402aa)
Chromate transport protein ChrA rbh
Chromate transporter {ECO:0000313|EMBL:AKE71715.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74703.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
Transporter n=22 Tax=Pseudomonas aeruginosa RepID=H3T615_PSEAE
Infant_2_PA_18_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18424..20040)
DNA (1617bp) protein (539aa)
Methyl-accepting chemotaxis protein
Chemotaxis transducer {ECO:0000313|EMBL:ETU92215.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin
Chemotaxis transducer n=26 Tax=Pseudomonas RepID=H3T614_PSEAE
Infant_2_PA_18_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20474..20725
DNA (252bp) protein (84aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR69595.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
Uncharacterized protein n=9 Tax=Pseudomonas RepID=I1AHL9_PSEAI
Infant_2_PA_18_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20869..22338
DNA (1470bp) protein (490aa)
phosphate transporter PitA
Phosphate transporter {ECO:0000313|EMBL:ETU92217.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin
Phosphate transporter n=24 Tax=Pseudomonas RepID=F5KLU1_PSEAI
Infant_2_PA_18_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22407..25178)
DNA (2772bp) protein (924aa)
Sensory box histidine kinase rbh
Two-component sensor PprA n=25 Tax=Pseudomonas RepID=B7UZ72_PSEA8
Sensory box histidine kinase {ECO:0000313|EMBL:BAR69597.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru
Infant_2_PA_18_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25188..25652)
DNA (465bp) protein (155aa)
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74708.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
pilus assembly protein
Uncharacterized protein n=25 Tax=Pseudomonas RepID=J6M5P0_PSEAI
Infant_2_PA_18_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25758..26240
DNA (483bp) protein (161aa)
type IV leader peptidase family protein
Flp prepilin peptidase A, FppA {ECO:0000313|EMBL:AAG07683.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
Flp prepilin peptidase A, FppA n=23 Tax=Pseudomonas RepID=F5KLU4_PSEAI
Infant_2_PA_18_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26362..27189
DNA (828bp) protein (276aa)
bacterial regulatory s, luxR family protein
Two-component response regulator, PprB {ECO:0000313|EMBL:AAG07684.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
Two-component response regulator, PprB n=24 Tax=Pseudomonas RepID=F5KLU5_PSEAI
Infant_2_PA_18_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27215..28885)
DNA (1671bp) protein (557aa)
TadG {ECO:0000313|EMBL:AAG07685.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 1
tad-like Flp pilus-assembly family protein
TadG n=24 Tax=Pseudomonas RepID=G2L7D3_PSEAI
Infant_2_PA_18_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28910..29194)
DNA (285bp) protein (95aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG07686.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
Uncharacterized protein n=22 Tax=Pseudomonas RepID=I6SNI0_PSEAI
Infant_2_PA_18_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29217..29954)
DNA (738bp) protein (246aa)
Flp pilus assembly protein TadD, contains TPR repeats
Pilus assembly protein {ECO:0000313|EMBL:ETU92224.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
TPR repeat-containing protein PA4299 n=22 Tax=Pseudomonas RepID=Y4299_PSEAE
Infant_2_PA_18_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29951..30862)
DNA (912bp) protein (304aa)
TadC n=24 Tax=Pseudomonas RepID=F5K7U0_PSEAI
Type II/IV secretion system protein TadC, associated with Flp pilus assembly
Uncharacterized protein {ECO:0000313|EMBL:ERV72345.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Infant_2_PA_18_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30872..31756)
DNA (885bp) protein (295aa)
Uncharacterized protein n=23 Tax=Pseudomonas RepID=G2UE24_PSEAI
Flp pilus assembly protein TadB
TadB {ECO:0000313|EMBL:AAG07689.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 1
Infant_2_PA_18_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31753..33018)
DNA (1266bp) protein (422aa)
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
ATPase {ECO:0000313|EMBL:AKE71728.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74716.1}; Putative type II secretion system protein {ECO:0000313|EMBL:CKI07762.1}; TaxID=287 sp
TadA ATPase n=24 Tax=Pseudomonas RepID=F5K7T8_PSEAI
Infant_2_PA_18_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33015..34199)
DNA (1185bp) protein (395aa)
protein TadZ
Flp pilus assembly protein CpaE {ECO:0000313|EMBL:BAR69607.1}; Pilus assembly protein {ECO:0000313|EMBL:AKE71729.1}; Protein TadZ {ECO:0000313|EMBL:CKI07802.1}; Pseudomonas aeruginosa genome assembly
TadZ n=26 Tax=Pseudomonas RepID=F5KLV2_PSEAI
Infant_2_PA_18_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34209..35459)
DNA (1251bp) protein (417aa)
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
RcpA {ECO:0000313|EMBL:AHW73002.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
Protein RcpA n=24 Tax=Pseudomonas RepID=I1AGJ3_PSEAI
Infant_2_PA_18_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35473..36384)
DNA (912bp) protein (304aa)
cpaB; Flp pilus assembly protein CpaB
RcpC {ECO:0000313|EMBL:AAG07693.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 1
RcpC n=23 Tax=Pseudomonas RepID=B7UZ84_PSEA8
Infant_2_PA_18_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36794..37006
DNA (213bp) protein (71aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDH79189.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
Type IVb pilin, Flp n=24 Tax=Pseudomonas RepID=F5KCY5_PSEAI
Infant_2_PA_18_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37195..39093
DNA (1899bp) protein (633aa)
Chemotaxis protein {ECO:0000313|EMBL:AKE71732.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
pctC; chemotactic transducer PctC
Chemotactic transducer PctC n=30 Tax=Pseudomonas RepID=B7UZ87_PSEA8
Infant_2_PA_18_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39197..40687)
DNA (1491bp) protein (497aa)
ATPase
Uncharacterized protein {ECO:0000313|EMBL:AAG07696.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
Uncharacterized protein n=25 Tax=Pseudomonas RepID=G2UE16_PSEAI
Displaying items 1-30 of 204 in total

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