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Infant_2_PA_52

Alias: i4.NODE_59_length_54967_cov_42.831810

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_PA_52_1
Pseudomonas sp. FGI182, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..83
DNA (81bp) protein (27aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHD12698.1}; TaxID=1259844 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FG
Aldehyde dehydrogenase (NAD+) n=2 Tax=Azotobacter vinelandii RepID=C1DML5_AZOVD
Infant_2_PA_52_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

387..512
DNA (126bp) protein (42aa)
Hypothetical protein
Coenzyme PQQ synthesis protein A {ECO:0000256|HAMAP-Rule:MF_00656}; Pyrroloquinoline quinone biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_00656}; TaxID=1402581 species="Bacteria; Proteobacteria;
Coenzyme PQQ synthesis protein A n=15 Tax=Pseudomonas RepID=PQQA_PSEA7
Infant_2_PA_52_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

565..1479
DNA (915bp) protein (305aa)
pqqB; coenzyme PQQ biosynthesis protein B rbh
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653, ECO:0000256|SAAS:SAAS00055095}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=1441931 spec
Coenzyme PQQ synthesis protein B n=25 Tax=Pseudomonas RepID=PQQB_PSEA7
Infant_2_PA_52_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1489..2241
DNA (753bp) protein (251aa)
pyrroloquinoline quinone biosynthesis protein PqqC
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinolin
Pyrroloquinoline-quinone synthase n=24 Tax=Pseudomonas RepID=PQQC_PSEA8
Infant_2_PA_52_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2238..2516
DNA (279bp) protein (93aa)
pyrroloquinoline quinone biosynthesis protein PqqD
Coenzyme PQQ synthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; Pyrroloquinoline quinone biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; TaxID=1457392 species="Bacteria; Proteobacteria;
Coenzyme PQQ synthesis protein D n=24 Tax=Pseudomonas RepID=PQQD_PSEA7
Infant_2_PA_52_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2488..3633
DNA (1146bp) protein (382aa)
pyrroloquinoline quinone biosynthesis protein PqqE
Pyrroloquinoline quinone biosynthesis protein PqqE {ECO:0000313|EMBL:CKH60731.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so
Coenzyme PQQ synthesis protein E n=24 Tax=Pseudomonas RepID=PQQE_PSEA8
Infant_2_PA_52_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3638..5464
DNA (1827bp) protein (609aa)
peptidase S9
Peptidase S9 {ECO:0000313|EMBL:AKE70242.1}; Putative peptidase {ECO:0000313|EMBL:CKH60679.1}; EC=3.4.14.12 {ECO:0000313|EMBL:CKH60679.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacte
PqqH n=23 Tax=Pseudomonas aeruginosa RepID=F5KBR1_PSEAI
Infant_2_PA_52_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5550..6713
DNA (1164bp) protein (388aa)
alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CEI20329.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
Iron-containing alcohol dehydrogenase n=25 Tax=Pseudomonas RepID=A4XTR6_PSEMY
Infant_2_PA_52_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6697..8388
DNA (1692bp) protein (564aa)
sensor histidine kinase
Two-component system sensor {ECO:0000313|EMBL:ETU83030.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
ErcS n=24 Tax=Pseudomonas RepID=K1CCT0_PSEAI
Infant_2_PA_52_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8421..9629)
DNA (1209bp) protein (403aa)
MFS transporter
UPF0226 membrane protein F22031_29470 {ECO:0000256|HAMAP-Rule:MF_01118}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
UPF0226 protein PA1993 n=26 Tax=Pseudomonas RepID=Y1993_PSEAE
Infant_2_PA_52_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9754..10317)
DNA (564bp) protein (188aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU83028.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Uncharacterized protein n=24 Tax=Pseudomonas RepID=G2UKM2_PSEAI
Infant_2_PA_52_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10314..10670)
DNA (357bp) protein (119aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV69705.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Uncharacterized protein n=24 Tax=Pseudomonas RepID=I1AGA6_PSEAI
Infant_2_PA_52_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10689..10967)
DNA (279bp) protein (93aa)
ppiC1; peptidyl-prolyl cis-trans isomerase C1
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
Peptidyl-prolyl cis-trans isomerase C1 n=24 Tax=Pseudomonas RepID=A3KTJ0_PSEAI
Infant_2_PA_52_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11025..12980)
DNA (1956bp) protein (652aa)
Acetoacetyl-CoA synthetase n=25 Tax=Pseudomonas RepID=I1AGA8_PSEAI
Acetoacetyl-CoA synthetase (EC:6.2.1.16)
Probable AMP-binding enzyme {ECO:0000313|EMBL:AAG05385.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ae
Infant_2_PA_52_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13048..13968)
DNA (921bp) protein (307aa)
LysR family transcriptional regulator
DhcR, transcriptional regulator {ECO:0000313|EMBL:AAG05386.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
DhcR, transcriptional regulator n=24 Tax=Pseudomonas RepID=Q9I2B1_PSEAE
Infant_2_PA_52_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14100..14798
DNA (699bp) protein (233aa)
succinyl-CoA:3-ketoacid-CoA transferase
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KFF34726.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
3-oxoacid CoA-transferase, A subunit n=30 Tax=Pseudomonas RepID=A4XRE1_PSEMY
Infant_2_PA_52_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14833..15489
DNA (657bp) protein (219aa)
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC:2.8.3.5)
CoA transferase subunit B {ECO:0000313|EMBL:EZO88404.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
DhcB, dehydrocarnitine CoA transferase, subunit B n=40 Tax=Gammaproteobacteria RepID=E3A3X7_PSEAI
Infant_2_PA_52_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15679..16860
DNA (1182bp) protein (394aa)
acetyl-CoA C-acetyltransferase family protein
Acetyl-CoA acetyltransferase; EC=2.3.1.9;; Acetoacetyl-CoA thiolase; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
Acetyl-CoA acetyltransferase n=24 Tax=Pseudomonas RepID=ATOB_PSEAE
Infant_2_PA_52_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17073..18497
DNA (1425bp) protein (475aa)
short chain fatty acid transporter
Short chain fatty acid transporter {ECO:0000313|EMBL:ETD47190.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
Membrane protein, putative n=25 Tax=Pseudomonas RepID=A6V6G6_PSEA7
Infant_2_PA_52_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18698..19468)
DNA (771bp) protein (257aa)
3-hydroxybutyrate dehydrogenase rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:CKH60052.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CKH60052.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
3-hydroxybutyrate dehydrogenase n=29 Tax=Pseudomonas RepID=A3KTJ7_PSEAI
Infant_2_PA_52_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19502..20893)
DNA (1392bp) protein (464aa)
D-beta-hydroxybutyrate permease
D-beta-hydroxybutyrate permease {ECO:0000313|EMBL:BAR68217.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
Uncharacterized protein n=24 Tax=Pseudomonas RepID=K1C120_PSEAI
Infant_2_PA_52_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21155..22600)
DNA (1446bp) protein (482aa)
Sigma-54 dependent transcriptional regulator rbh
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:BAR68216.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
Transcriptional regulator n=24 Tax=Pseudomonas RepID=F5K237_PSEAI
Infant_2_PA_52_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22700..24052)
DNA (1353bp) protein (451aa)
Major facilitator superfamily (MFS) transporter n=24 Tax=Pseudomonas RepID=J7A2K7_PSEAI
putative major facilitator superfamily transporter
MFS family transporter {ECO:0000313|EMBL:ETU83016.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
Infant_2_PA_52_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24137..24775)
DNA (639bp) protein (213aa)
maiA; maleylacetoacetate isomerase
Maleylacetoacetate isomerase {ECO:0000313|EMBL:AKE70225.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74854.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteri
Maleylacetoacetate isomerase n=24 Tax=Pseudomonas RepID=MAAI_PSEAE
Infant_2_PA_52_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24772..26070)
DNA (1299bp) protein (433aa)
fahA; fumarylacetoacetase
Fumarylacetoacetase {ECO:0000313|EMBL:BAR68213.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Fumarylacetoacetase n=25 Tax=Pseudomonas RepID=B7VA97_PSEA8
Infant_2_PA_52_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26075..27373)
DNA (1299bp) protein (433aa)
Homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase {ECO:0000255|HAMAP-Rule:MF_00334}; Short=HGDO {ECO:0000255|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000255|HAMAP-Rule:MF_00334};; Homogentisate oxygenase {ECO:0000255|HA
Homogentisate 1,2-dioxygenase n=24 Tax=Pseudomonas RepID=HGD_PSEA7
Infant_2_PA_52_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27534..28337
DNA (804bp) protein (268aa)
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:EZO88394.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
IclR family transcriptional regulator n=25 Tax=Pseudomonas RepID=G4LFB5_PSEAI
Infant_2_PA_52_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28405..29307)
DNA (903bp) protein (301aa)
liuE; hydroxymethylglutaryl-CoA lyase
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:CKH59743.1}; EC=4.1.3.4 {ECO:0000313|EMBL:CKH59743.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonad
3-hydroxy-gamma-carboxygeranoyl-CoA lyase, GnyL n=24 Tax=Pseudomonas RepID=A3KTK4_PSEAI
Infant_2_PA_52_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29328..30122)
DNA (795bp) protein (265aa)
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC:6.4.1.4)
3-methylcrotonyl-CoA carboxylase {ECO:0000313|EMBL:AKE70220.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
Alpha subunit of geranoyl-CoA carboxylase, GnyA n=29 Tax=Pseudomonas RepID=A3KTK5_PSEAI
Infant_2_PA_52_30
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30292..31410
DNA (1119bp) protein (373aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE09403.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
Putative uncharacterized protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08Z07_STIAD
choline dehydrogenase
Displaying items 1-30 of 54 in total

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