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Infant_2_PA_11_5

Organism: Infant_2_PA

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 0 / 38
Location: comp(3355..7554)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2741
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2741
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=121 Tax=Gammaproteobacteria RepID=RPOC_PSE14 similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 2568
  • Evalue 0.0

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4200
TTGAAAGACTTGCTTAATCTGTTGAAAAACCAGGGTCAAATCGAAGAGTTCGATGCCATCCGTATTGGCCTGGCTTCGCCCGAGATGATTCGTTCCTGGTCTTTCGGCGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACCTTCAAGCCGGAGCGCGACGGCCTGTTCTGCGCCAAGATCTTCGGCCCGGTGAAGGATTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGTGTGATCTGCGAGAAGTGCGGCGTGGAAGTCGCCCTGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCTTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGCCTGCTGCTGGACATGACCCTGCGCGATATCGAGCGCGTGCTCTATTTCGAGAGCTACGTGGTGATCGATCCGGGCATGACCACCCTGGAAAAGGGCCAGCTGCTGAACGACGAGCAATACTTCGAGGCCCTCGAAGAGTTCGGTGACGATTTCGATGCTCGCATGGGCGCCGAAGCCGTTCACGAACTGCTCAACGCCATCGACCTGGAGCACGAGATCGGCCGCCTGCGCGAAGAGATTCCGCAGACCAACTCGGAAACCAAGATCAAGAAGCTGTCCAAGCGCCTGAAGCTGATGGAAGCCTTCCAGGGCTCCGGCAACAAGCCTGAGTGGATGGTCCTGACCGTCCTGCCGGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGCGGTCGCTTCGCGACTTCCGACCTGAACGACCTGTATCGTCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTCGACCTGGCTGCTCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCCGTCGACGCCCTGCTCGACAACGGCCGTCGCGGTCGCGCCATCACCGGCTCGAACAAGCGTCCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGCAAGGTCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTGGACTACTCCGGTCGTTCCGTGATCACCGTGGGCCCGACCCTGCGCCTGCACCAGTGCGGTCTGCCGAAGAAGATGGCCCTGGAGCTGTTCAAGCCGTTCATCTTCGGCAAGCTGGAAGGTCGTGGTATGGCCACCACCATCAAGGCCGCCAAGAAAATGGTCGAGCGCGAGCTGCCCGAGGTCTGGGACGTTCTCGCCGAAGTCATCCGCGAGCATCCGGTTCTCCTGAACCGTGCGCCGACCCTGCACCGTCTGGGCATCCAGGCGTTCGAGCCGGTCCTCATCGAAGGCAAGGCGATCCAGCTGCACCCGCTGGTCTGCGCCGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTCCACGTTCCGCTGACCCTCGAGGCCCAGCTGGAAGCGCGCGCGCTGATGATGTCCACCAACAACATCCTGTCGCCCGCCAACGGCGAGCCGATCATCGTTCCGTCGCAGGACGTGGTAATGGGTCTGTACTACATGACCCGTGAAGCGATCAACGCGAAGGGCGAGGGCATGGCCTTCGCCGACCTGCAGGAAGTCGACCGCGCCTACCGCAGCGGCCAGGCGTCCCTGCACGCTCGCGTAAAAGTGCGCATCAACGAAAAGATCAAGGGTGAAGACGGCCAACTGACCGCCAATACCCGTATCGTCGACACCACCGTCGGTCGCGCGCTGCTGTTCCAGGTCGTTCCGGCCGGCCTGCCGTTCGACGTGGTCAACCAGTCGATGAAGAAGAAGGCGATCTCCAAGCTGATCAACCACTGCTATCGCGTGGTGGGTCTGAAGGACACCGTCATCTTCGCCGACCAGCTGATGTACACCGGTTTCGCCTACTCGACCATTTCCGGCGTGTCCATCGGCGTCAACGACTTCGTCATCCCGGACGAGAAGGCGCGGATCATCAACGCCGCCACCGACGAAGTGAAGGAGATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTGATCGACCTATGGTCGAAGGCCAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAAGGTCGTCGATCGCGAGGGCAAGGAAGTCGACCAGGAGTCCTTCAACTCCATGTACATGATGGCTGACTCGGGTGCGCGGGGCTCCGCGGCCCAGATCCGTCAGCTGGCAGGTATGCGTGGCCTGATGGCCAAGCCGGACGGCTCGATCATCGAGACCCCGATCACCGCGAACTTCCGGGAAGGCCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAGGGTCTGGCGGATACCGCGCTGAAGACCGCGAACTCCGGTTACCTGACCCGTCGTCTGGTCGACGTGGCCCAGGATCTGGTAGTGACCGAGATCGATTGCGGTACCGAGCACGGCCTGCTGATGTCGCCGCACATCGAAGGCGGCGACGTGGTCGAACCGCTCGGCGAGCGCGTGCTCGGCCGTGTGATCGCGCGCGACGTGTTCAAGCCGGGCAGCGACGAGGTCATCGTGCCGGCCGGCACCCTGATCGACGAGAAGTGGGTCGACTTCCTCGAAGTGATGAGCGTCGACGAAGTGGTGGTGCGTTCCCCGATCACCTGCGAAACCCGTCATGGCATCTGCGCCATGTGCTACGGCCGCGACCTGGCGCGTGGCCATCGCGTCAACATCGGCGAGGCGGTCGGTGTCATCGCTGCCCAGTCCATCGGTGAGCCGGGCACCCAGCTGACCATGCGTACCTTCCACATCGGTGGTGCGGCCAGCCGGACCTCCGCGGCCGACAACGTCCAGGTGAAGAACGGCGGCACCATCCGCCTGCACAACCTGAAGCATGTGGTTCGTGCCGACGGCGCGCTGGTCGCGGTTTCCCGTTCCGGCGAACTGGCGGTTGCCGACGACTTCGGTCGCGAGCGCGAGCGCTACAAGCTGCCGTACGGTGCGGTGATCTCGGTCAAGGAAGGTGACAAGGTCGACCCGGGCGCTATCGTCGCCAAGTGGGACCCGCACACCCACCCGATCGTCACCGAGGTGGACGGTACCGTGGCCTTCGTGGGCATGGAAGAGGGCATCACCGTCAAGCGTCAGACCGACGAACTGACCGGCCTGACCAACATCGAAGTGATGGATCCGAAGGACCGTCCGGCTGCCGGCAAGGACATCCGTCCGGCCGTGAAGCTGATCGATGCCGCGGGCAAGGACCTGCTGCTGCCGGGTACCGACCTACCGGCGCAGTACTTCCTGCCGGCCAACGCCCTGGTCAACCTGACCGACGGCGCCAAGGTGAGCATCGGTGACGTTGTCGCGCGTATCCCGCAGGAAACCTCGAAGACCCGTGACATCACCGGTGGTCTGCCGCGCGTTGCCGACCTGTTCGAGGCTCGTCGTCCGAAAGAGCCTTCGATCCTGGCGGAAATCAGCGGCACCATCTCCTTCGGCAAGGAGACCAAGGGCAAGCGCCGCCTGGTCATCACGCCGAACGATGGCAGCGATCCGTACGAGGAGCTGATTCCGAAGTGGCGTCACCTGAACGTGTTCGAAGGCGAACAGGTGAACCGCGGCGAAGTCATCTCCGACGGTCCGAGCAACCCGCACGACATCCTGCGCCTGCTGGGCGTGAGCTCGCTGGCGAAGTACATCGTCAACGAGATCCAGGACGTCTACCGTCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGACCATCCTGCGTCAGATGCTGCGCAAGGTCGAAGTCAGTGAGTCCGGCGACTCCAGCTTCATCAAAGGCGACCAGGTGGAACTCACCCAGGTGCTGGAAGAGAACGAACAGCTCGGTACCGAGGACAAGTTCCCGGCCAAGTACGAGCGGGTTCTGCTGGGTATCACCAAGGCCTCCCTGTCGACCGAGTCGTTCATTTCCGCGGCGTCGTTCCAGGAGACCACCCGCGTCCTCACCGAGGCGGCGGTCACCGGCAAGCGCGACTTCCTGCGTGGTCTGAAAGAGAACGTGGTCGTGGGTCGCCTGATCCCGGCCGGTACCGGTCTGGCTTACCACAGCGAGCGCAAGCGTCAGCGCGACCTCGGCAAGCCGCAGCGTGTGAGTGCCAGCGAGGCGGAAGCCGCACTGACCGAAGCGCTGAACTCGAGCGGTAACTAA
PROTEIN sequence
Length: 1400
LKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARMGAEAVHELLNAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNKPEWMVLTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIFGKLEGRGMATTIKAAKKMVERELPEVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVMGLYYMTREAINAKGEGMAFADLQEVDRAYRSGQASLHARVKVRINEKIKGEDGQLTANTRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKKAISKLINHCYRVVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIINAATDEVKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVVDREGKEVDQESFNSMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLLMSPHIEGGDVVEPLGERVLGRVIARDVFKPGSDEVIVPAGTLIDEKWVDFLEVMSVDEVVVRSPITCETRHGICAMCYGRDLARGHRVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIRLHNLKHVVRADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDPGAIVAKWDPHTHPIVTEVDGTVAFVGMEEGITVKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAVKLIDAAGKDLLLPGTDLPAQYFLPANALVNLTDGAKVSIGDVVARIPQETSKTRDITGGLPRVADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNVFEGEQVNRGEVISDGPSNPHDILRLLGVSSLAKYIVNEIQDVYRLQGVKINDKHIETILRQMLRKVEVSESGDSSFIKGDQVELTQVLEENEQLGTEDKFPAKYERVLLGITKASLSTESFISAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRQRDLGKPQRVSASEAEAALTEALNSSGN*