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Infant_2_PA_11

Alias: i3.NODE_66_length_15953_cov_55.814831

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_PA_11_1
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..80)
DNA (78bp) protein (26aa)
tuf3; elongation factor Tu Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
Putative uncharacterized protein n=3 Tax=Pseudomonas RepID=F2MZM9_PSEU6
Infant_2_PA_11_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(111..2231)
DNA (2121bp) protein (707aa)
fusA1; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonad
Elongation factor G n=3 Tax=Pseudomonas RepID=I7KBE2_PSEPS
Infant_2_PA_11_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2262..2732)
DNA (471bp) protein (157aa)
SSU ribosomal protein S7p (S5e)
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
30S ribosomal protein S7 n=172 Tax=Pseudomonadaceae RepID=RS7_PSEPF
Infant_2_PA_11_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2832..3203)
DNA (372bp) protein (124aa)
SSU ribosomal protein S12p (S23e)
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=557722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
30S ribosomal protein S12 n=17 Tax=Gammaproteobacteria RepID=RS12_MARAV
Infant_2_PA_11_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3355..7554)
DNA (4200bp) protein (1400aa)
DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=121 Tax=Gammaproteobacteria RepID=RPOC_PSE14
Infant_2_PA_11_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7620..11693)
DNA (4074bp) protein (1358aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=429 Tax=Bacteria RepID=RPOB_AZOVD
Infant_2_PA_11_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11915..12283)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
50S ribosomal protein L7/L12 n=31 Tax=Pseudomonadaceae RepID=RL7_AZOVD
Infant_2_PA_11_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12362..12862)
DNA (501bp) protein (167aa)
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
50S ribosomal protein L10 n=41 Tax=Pseudomonadaceae RepID=RL10_AZOVD
Infant_2_PA_11_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13061..13756)
DNA (696bp) protein (232aa)
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
50S ribosomal protein L1 n=33 Tax=Pseudomonadaceae RepID=RL1_AZOVD
Infant_2_PA_11_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13756..14187)
DNA (432bp) protein (144aa)
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
50S ribosomal protein L11 n=114 Tax=Pseudomonadaceae RepID=RL11_AZOVD
Infant_2_PA_11_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14304..14837)
DNA (534bp) protein (178aa)
Transcription antitermination protein NusG n=120 Tax=Pseudomonadaceae RepID=NUSG_PSEAE
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomona
Infant_2_PA_11_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14847..15215)
DNA (369bp) protein (123aa)
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
Preprotein translocase subunit SecE n=19 Tax=Pseudomonas aeruginosa RepID=SECE_PSEAE
Infant_2_PA_11_13
unknown

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comp(15212..15358)
DNA (147bp) protein (49aa)
0
Infant_2_PA_11_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15392..16003)
DNA (612bp) protein (204aa)
Translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Elongation factor Tu n=1 Tax=Pseudomonas aeruginosa MPAO1/P2 RepID=H3TIS5_PSEAE
Displaying 14 items

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