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Infant_2_SE_40

Alias: i2.NODE_338_length_48534_cov_65.759903

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_SE_40_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..305)
DNA (303bp) protein (101aa)
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococ
Ribosome maturation factor RimM n=61 Tax=Staphylococcus RepID=RIMM_STAEQ
Infant_2_SE_40_2
Staphylococcus caprae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(432..707)
DNA (276bp) protein (92aa)
SSU ribosomal protein S16p
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=525378 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus caprae M23864:W1.;"
30S ribosomal protein S16 n=74 Tax=Staphylococcus RepID=RS16_STAEQ
Infant_2_SE_40_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1014..2381)
DNA (1368bp) protein (456aa)
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyloco
Signal recognition particle protein n=254 Tax=Staphylococcus RepID=H7G7C2_STAA5
Infant_2_SE_40_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2412..2744)
DNA (333bp) protein (111aa)
hypothetical protein
UPF0122 protein SERP0802 {ECO:0000255|HAMAP-Rule:MF_00245}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / R
UPF0122 protein SE_0911 n=62 Tax=Staphylococcus RepID=Y911_STAES
Infant_2_SE_40_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2746..3972)
DNA (1227bp) protein (409aa)
ftsY; cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sta
Signal recognition particle receptor FtsY n=65 Tax=Staphylococcus RepID=B9CTN0_STACP
Infant_2_SE_40_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3969..7538)
DNA (3570bp) protein (1190aa)
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
chromosome segregation SMC protein
Chromosome partition protein Smc n=58 Tax=Staphylococcus RepID=C5Q8M1_STAEP
Infant_2_SE_40_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7665..8402)
DNA (738bp) protein (246aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=61 Tax=Staphylococcus RepID=RNC_STAEQ
Infant_2_SE_40_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8517..8750)
DNA (234bp) protein (78aa)
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; St
Acyl carrier protein n=258 Tax=Staphylococcus RepID=ACP_STAA1
Infant_2_SE_40_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9074..9808)
DNA (735bp) protein (245aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase FabG; EC=1.1.1.100;; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; TaxID=176280 speci
3-oxoacyl-[acyl-carrier-protein] reductase FabG n=249 Tax=Staphylococcus RepID=FABG_STAAC
Infant_2_SE_40_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9801..10730)
DNA (930bp) protein (310aa)
fabD; malonyl CoA-ACP transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyloco
Malonyl CoA-acyl carrier protein transacylase n=61 Tax=Staphylococcus RepID=C5QWJ5_STAEP
Infant_2_SE_40_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10732..11709)
DNA (978bp) protein (326aa)
plsX; glycerol-3-phosphate acyltransferase PlsX
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=65 Tax=Staphylococcus RepID=PLSX_STAES
Infant_2_SE_40_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11711..12322)
DNA (612bp) protein (204aa)
fatty acid biosynthesis transcriptional regulator
Putative transcription factor FapR {ECO:0000313|EMBL:EES36396.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Transcription factor FapR n=62 Tax=Staphylococcus RepID=FAPR_STAEQ
Infant_2_SE_40_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12432..14480)
DNA (2049bp) protein (683aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG; EC=3.6.4.12;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
ATP-dependent DNA helicase RecG n=60 Tax=Staphylococcus RepID=RECG_STAEQ
Infant_2_SE_40_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14684..16342)
DNA (1659bp) protein (553aa)
Uncharacterized protein {ECO:0000313|EMBL:ESV19254.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
DAK2 domain-containing protein
Uncharacterized protein SERP0792 n=60 Tax=Staphylococcus RepID=Y792_STAEQ
Infant_2_SE_40_15
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16357..16731)
DNA (375bp) protein (125aa)
hypothetical protein
Alkaline shock protein {ECO:0000313|EMBL:ETJ12778.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Alkaline shock protein n=65 Tax=Staphylococcus RepID=C5QRH1_STAEP
Infant_2_SE_40_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


17089..17277
DNA (189bp) protein (63aa)
LSU ribosomal protein L28p
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
50S ribosomal protein L28 n=254 Tax=Staphylococcus RepID=RL28_STAA1
Infant_2_SE_40_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17360..17677)
DNA (318bp) protein (106aa)
Thiamin pyrophosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase {ECO:0000313|EMBL:EFE59483.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EFE59483.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloco
Thiamine diphosphokinase n=60 Tax=Staphylococcus RepID=C5Q8L0_STAEP
Infant_2_SE_40_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18041..18280)
DNA (240bp) protein (80aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
Ribulose-phosphate 3-epimerase n=61 Tax=Staphylococcus RepID=C5Q8K9_STAEP
Infant_2_SE_40_19
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18691..19275)
DNA (585bp) protein (195aa)
Ribosome small subunit-stimulated GTPase EngC
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococ
Putative ribosome biogenesis GTPase RsgA n=63 Tax=Staphylococcus RepID=RSGA_STAEQ
Infant_2_SE_40_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19948..21951)
DNA (2004bp) protein (668aa)
Kinase domain protein n=61 Tax=Staphylococcus RepID=H3UJQ7_STAEP
Serine/threonine protein kinase PrkC, regulator of stationary phase
Kinase domain protein {ECO:0000313|EMBL:EFE59486.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Infant_2_SE_40_21
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21948..22691)
DNA (744bp) protein (248aa)
Protein serine/threonine phosphatase PrpC,regulation of stationary phase
Phosphoprotein phosphatase {ECO:0000313|EMBL:ETJ12772.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Phosphoprotein phosphatase n=61 Tax=Staphylococcus RepID=C5QWI4_STAEP
Infant_2_SE_40_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22698..23792)
DNA (1095bp) protein (365aa)
Ribosomal RNA large subunit methyltransferase N (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=251 Tax=Staphylococcus RepID=RLMN_STAA1
Infant_2_SE_40_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23795..24568)
DNA (774bp) protein (258aa)
Ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyloc
Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Staphylococcus epidermidis VCU105 RepID=F9LHT1_STAEP
Infant_2_SE_40_24
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26076..26564)
DNA (489bp) protein (163aa)
Peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase-like n=61 Tax=Staphylococcus RepID=DEFL_STAEQ
Infant_2_SE_40_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26786..26989
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54198.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Toxin-antitoxin system, antitoxin component, Xre family n=61 Tax=Staphylococcus RepID=D1WM78_STAEP
Infant_2_SE_40_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27095..27298)
DNA (204bp) protein (68aa)
Helicase PriA essential for oriC/DnaA-independent DNA replication
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=525376 species="Bacteria; F
Primosomal protein N' n=1 Tax=Staphylococcus epidermidis VCU057 RepID=H3UJR4_STAEP
Infant_2_SE_40_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27343..29751)
DNA (2409bp) protein (803aa)
priA; primosomal protein N'
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=176279 species="Bacteria; F
DNA replication factor Y n=60 Tax=Staphylococcus RepID=C5Q8K0_STAEP
Infant_2_SE_40_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29751..30302)
DNA (552bp) protein (184aa)
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase (EC:4.1.1.36)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFE59494.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFE59494.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFE59494.1};; Tax
Phosphopantothenate--cysteine ligase n=60 Tax=Staphylococcus RepID=C5Q8J9_STAEP
Infant_2_SE_40_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31847..32338)
DNA (492bp) protein (164aa)
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=264 Tax=Staphylococcus RepID=KGUA_STAES
Infant_2_SE_40_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32778..34475
DNA (1698bp) protein (566aa)
Fibrinogen-binding protein n=61 Tax=Staphylococcus RepID=C5Q8J6_STAEP
Fibronectin/fibrinogen-binding protein
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:EFE59497.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864
Displaying items 1-30 of 44 in total

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