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Infant_2_SE_43

Alias: i2.NODE_369_length_27580_cov_57.537090

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_SE_43_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27..1301)
DNA (1275bp) protein (425aa)
Threonine dehydratase (EC:4.3.1.19)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=525375 species="Bacteria; Firmicutes;
L-threonine dehydratase biosynthetic IlvA n=61 Tax=Staphylococcus RepID=ILVA_STAEQ
Infant_2_SE_43_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1310..1879)
DNA (570bp) protein (190aa)
3-isopropylmalate dehydratase small subunit n=59 Tax=Staphylococcus RepID=LEUD_STAEQ
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
Infant_2_SE_43_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1880..2377)
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase large subunit n=65 Tax=Staphylococcus RepID=LEUC_STAEQ
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
Infant_2_SE_43_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3344..4387)
DNA (1044bp) protein (348aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=59 Tax=Staphylococcus RepID=LEU3_STAEQ
Infant_2_SE_43_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4384..5919)
DNA (1536bp) protein (512aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:
2-isopropylmalate synthase n=56 Tax=Staphylococcus RepID=LEU1_STAEQ
Infant_2_SE_43_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5942..6946)
DNA (1005bp) protein (335aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=62 Tax=Bacteria RepID=ILVC_STAEQ
Infant_2_SE_43_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7063..7296)
DNA (234bp) protein (78aa)
Acetolactate synthase small subunit (EC:2.2.1.6)
ACT domain protein {ECO:0000313|EMBL:EFE58453.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Acetolactate synthase small subunit n=60 Tax=Staphylococcus RepID=C5Q690_STAEP
Infant_2_SE_43_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7296..9038)
DNA (1743bp) protein (581aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloc
ilvB; acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=29 Tax=Staphylococcus epidermidis RepID=Q8CNL5_STAES
Infant_2_SE_43_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9055..10905)
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase n=253 Tax=Staphylococcus RepID=ILVD_STAEQ
Dihydroxy-acid dehydratase (EC:4.2.1.9)
Infant_2_SE_43_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11222..11683
DNA (462bp) protein (154aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW55002.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
ATP-binding protein n=61 Tax=Staphylococcus RepID=C5QUK3_STAEP
Infant_2_SE_43_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11664..12326
DNA (663bp) protein (221aa)
Inactive homolog of metal-dependent proteases,putative molecular chaperone
Uncharacterized protein {ECO:0000313|EMBL:AAW55001.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
M22 family O-sialoglycoprotein endopeptidase n=61 Tax=Staphylococcus RepID=C5Q694_STAEP
Infant_2_SE_43_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12299..12760
DNA (462bp) protein (154aa)
Ribosomal-protein-alanine acetyltransferase n=61 Tax=Staphylococcus RepID=D1WIJ2_STAEP
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Alanine acetyltransferase {ECO:0000313|EMBL:ESV20059.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Infant_2_SE_43_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12757..13779
DNA (1023bp) protein (341aa)
FIG134348: essential endopeptidase
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp n=60 Tax=Staphylococcus RepID=GCP_STAEQ
Infant_2_SE_43_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13862..15478)
DNA (1617bp) protein (539aa)
MutS domain V protein {ECO:0000313|EMBL:EFE58460.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
DNA mismatch repair protein MutS n=57 Tax=Staphylococcus RepID=C5Q697_STAEP
DNA mismatch repair protein MutS
Infant_2_SE_43_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15820..17754)
DNA (1935bp) protein (645aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58461.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey
vga protein
ABC transporter, ATP-binding protein n=59 Tax=Staphylococcus RepID=Q5HMH0_STAEQ
Infant_2_SE_43_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18102..18737
DNA (636bp) protein (212aa)
oxidoreductase , NAD-binding Rossmann fold family protein
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23
Redox-sensing transcriptional repressor rex n=61 Tax=Staphylococcus RepID=REX_STAEQ
Infant_2_SE_43_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18876..19157
DNA (282bp) protein (94aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58463.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein n=35 Tax=Staphylococcus epidermidis RepID=J0EN58_STAEP
Infant_2_SE_43_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19243..20295
DNA (1053bp) protein (351aa)
hypothetical protein
YeeE/YedE family protein {ECO:0000313|EMBL:EFE58464.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
YeeE/YedE family protein n=59 Tax=Staphylococcus RepID=H0DT51_STAEP
Infant_2_SE_43_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20347..20571
DNA (225bp) protein (75aa)
Hypothetical protein SAV2044
Uncharacterized protein {ECO:0000313|EMBL:EFE58465.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Transcription regulator n=52 Tax=Staphylococcus RepID=C5Q6A3_STAEP
Infant_2_SE_43_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20964..22241
DNA (1278bp) protein (426aa)
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ammonium transporter n=60 Tax=Staphylococcus RepID=H3URI3_STAEP
probabale ammonium transporter
Infant_2_SE_43_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22376..23329
DNA (954bp) protein (318aa)
Sucrose operon repressor {ECO:0000313|EMBL:EFE58467.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
helix-turn-helix family protein
Sucrose operon repressor n=61 Tax=Staphylococcus RepID=C5Q6A5_STAEP
Infant_2_SE_43_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26219..26458)
DNA (240bp) protein (80aa)
Response regulator of the competence regulon ComE
Accessory gene regulator protein A; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Accessory gene regulator protein A n=71 Tax=Staphylococcus RepID=AGRA_STAEQ
Displaying 22 items

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