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Infant_2_SE_55

Alias: i2.NODE_442_length_28251_cov_64.321404

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_SE_55_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..1190)
DNA (1188bp) protein (396aa)
gram-positive signal peptide, YSIRK family domain protein
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Staphylococcus aureus subsp. aureus IS-250 RepID=I0TMR6_STAAU
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EFE59554.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis
Infant_2_SE_55_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1319..1522)
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59553.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein n=12 Tax=Staphylococcus RepID=I0TMS6_STAAU
Infant_2_SE_55_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1529..2269
DNA (741bp) protein (247aa)
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFE59552.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).
RNA 2'-O ribose methyltransferase substrate binding family protein
TrmH family rRNA methyltransferase n=60 Tax=Staphylococcus RepID=C5QWB9_STAEP
Infant_2_SE_55_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2953..3717
DNA (765bp) protein (255aa)
pheS; phenylalanine--tRNA ligase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=53 Tax=Staphylococcus RepID=SYFA_STAES
Infant_2_SE_55_5
unknown

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comp(4900..5187)
DNA (288bp) protein (96aa)
0
Infant_2_SE_55_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5846..6169
DNA (324bp) protein (108aa)
Phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283};
Phenylalanine--tRNA ligase beta subunit n=61 Tax=Staphylococcus RepID=SYFB_STAEQ
Infant_2_SE_55_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6221..7147)
DNA (927bp) protein (309aa)
Ribonuclease HIII (EC:3.1.26.4)
Ribonuclease HIII {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088219}; Short=RNase HIII {ECO:0000256|HAMAP-Rule:MF_00053};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:
Ribonuclease HIII n=60 Tax=Staphylococcus RepID=RNH3_STAEQ
Infant_2_SE_55_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7408..7674
DNA (267bp) protein (89aa)
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Cell division protein ZapA n=60 Tax=Staphylococcus RepID=C5Q8E6_STAEP
Infant_2_SE_55_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7675..8196
DNA (522bp) protein (174aa)
Colicin V production protein
CvpA family protein {ECO:0000313|EMBL:EFE59547.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Colicin V production protein n=61 Tax=Staphylococcus RepID=C5QWC4_STAEP
Infant_2_SE_55_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9786..10049
DNA (264bp) protein (88aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ14088.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
DNA-dependent DNA polymerase family X n=62 Tax=Staphylococcus RepID=J0PCG9_STAEP
Infant_2_SE_55_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12674..12988
DNA (315bp) protein (105aa)
Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Thioredoxin n=241 Tax=Staphylococcus RepID=THIO_STAA3
Infant_2_SE_55_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13856..14920
DNA (1065bp) protein (355aa)
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
UvrABC system protein C n=68 Tax=Staphylococcus RepID=UVRC_STAEQ
Infant_2_SE_55_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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15287..15901
DNA (615bp) protein (205aa)
Succinate dehydrogenase, cytochrome b556 subunit n=67 Tax=Staphylococcus RepID=H0DL86_STAEP
succinate dehydrogenase cytochrome b-558
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ETJ08950.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22
Infant_2_SE_55_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16054..17820
DNA (1767bp) protein (589aa)
Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:EFE59541.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EFE59541.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.
Succinate dehydrogenase flavoprotein subunit n=254 Tax=Staphylococcus RepID=F9KS35_STAAU
Infant_2_SE_55_15
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17820..18662
DNA (843bp) protein (281aa)
Succinate dehydrogenase iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:ETJ08952.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Succinate dehydrogenase iron-sulfur subunit n=65 Tax=Staphylococcus RepID=C5Q8F4_STAEP
Infant_2_SE_55_16
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18825..19628
DNA (804bp) protein (268aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1403935 species="Bacteria; Firm
Glutamate racemase n=65 Tax=Staphylococcus RepID=MURI_STAEQ
Infant_2_SE_55_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19643..20230
DNA (588bp) protein (196aa)
Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP,XTP-specific) (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000255|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; N
Non-canonical purine NTP pyrophosphatase n=2 Tax=Staphylococcus epidermidis RepID=J0EDW9_STAEP
Infant_2_SE_55_18
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20223..20732
DNA (510bp) protein (170aa)
phosphoesterase, putative
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus
Phosphoesterase n=57 Tax=Staphylococcus RepID=C5QWD5_STAEP
Infant_2_SE_55_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21397..21528
DNA (132bp) protein (44aa)
hemolytic family protein
Uncharacterized protein {ECO:0000313|EMBL:EES36415.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Phenol soluble modulin beta 1 n=44 Tax=Staphylococcus RepID=Q5HQ21_STAEQ
Infant_2_SE_55_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21584..21718
DNA (135bp) protein (45aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59534.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Antibacterial protein n=61 Tax=Staphylococcus RepID=C5QWD7_STAEP
Infant_2_SE_55_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21770..21904
DNA (135bp) protein (45aa)
hypothetical protein
Antibacterial protein 3 {ECO:0000313|EMBL:EES36401.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Antibacterial protein 1 n=64 Tax=Staphylococcus RepID=J0EDB3_STAEP
Infant_2_SE_55_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21960..22094
DNA (135bp) protein (45aa)
hypothetical protein
Antibacterial protein 3 {ECO:0000313|EMBL:EES36401.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Antibacterial protein 1 n=64 Tax=Staphylococcus RepID=J0EDB3_STAEP
Infant_2_SE_55_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22202..22888
DNA (687bp) protein (229aa)
5'-nucleotidase YjjG (EC:3.1.3.5)
HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EFE59531.1}; EC=3.8.1.2 {ECO:0000313|EMBL:EFE59531.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
Possible 5'-nucleotidase n=59 Tax=Staphylococcus RepID=C5QWD9_STAEP
Infant_2_SE_55_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22997..23437)
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized N-acetyltransferase HMPREF0794_0817 {ECO:0000256|HAMAP-Rule:MF_00824}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00824};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; S
Uncharacterized N-acetyltransferase SERP0741 n=60 Tax=Staphylococcus RepID=Y741_STAEQ
Infant_2_SE_55_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24698..25294
DNA (597bp) protein (199aa)
bshC; bacillithiol biosynthesis cysteine-adding enzyme BshC
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=525375 species="Bact
UPF0747 protein SERP0742 n=61 Tax=Staphylococcus RepID=Y742_STAEQ
Infant_2_SE_55_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25438..25869
DNA (432bp) protein (144aa)
Cell division protein MraZ
Transcriptional regulator MraZ; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Protein MraZ n=255 Tax=Staphylococcus RepID=MRAZ_STAAU
Infant_2_SE_55_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26852..27253
DNA (402bp) protein (134aa)
ftsL; cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Cell division protein FtsL n=65 Tax=Staphylococcus RepID=C5QWE5_STAEP
Infant_2_SE_55_28
Staphylococcus caprae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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28195..28335
DNA (141bp) protein (47aa)
Cell division protein FtsI [Peptidoglycan synthetase] (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EES40432.1}; TaxID=525378 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus capra
Penicillin-binding protein 1 n=59 Tax=Staphylococcus RepID=C5Q8G8_STAEP
Displaying 28 items

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