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Infant_2_SE_27_12

Organism: Infant_2_SE

partial RP 21 / 55 MC: 2 BSCG 22 / 51 MC: 2 ASCG 0 / 38
Location: comp(11095..12201)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 368.0
  • Bit_score: 721
  • Evalue 1.10e-205
RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 1 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 368.0
  • Bit_score: 721
  • Evalue 5.60e-205
RNA polymerase sigma factor RpoD n=256 Tax=Staphylococcus RepID=RPOD_STAA8 similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 704
  • Evalue 1.00e+00

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1107
ATGTCTGACAACCAAGTTAAAATTAAAAAGCAAACAATTGATCCGACTTTAACACTAGAAGATGTTAAAAAACAATTAATTGATAAAGGAAAAAAAGAAGGTCATTTAAGTCACGAAGAAATCGCTGAAAAACTGCAAAATTTTGAAATGGACTCAGATCAAATGGATGATTTCTTCGACCAATTGAATGACAATGACATTACACTTGTTAATGAAAAAGATAGTTCTGACACGGATGATAAAATCAATCCTAATGATTTGAGTGCCCCTCCTGGTGTCAAAATCAATGACCCAGTGCGTATGTATTTAAAGGAAATTGGTAGAGTTAATCTTTTAAGTGCTCAAGAAGAAATTGAGCTTGCAAAAAGAATTGAACAAGGTGATGAAATTGCTAAATCACGATTAGCTGAAGCAAACTTGCGTTTAGTTGTTAGTATTGCTAAACGATATGTTGGTCGTGGAATGTTATTCTTAGATTTGATTCAAGAAGGTAATATGGGCTTAATTAAAGCTGTGGAAAAGTTTGATTTTAGCAAAGGATTTAAATTTTCAACATATGCCACTTGGTGGATTAGACAAGCTATTACACGAGCAATTGCTGACCAAGCACGTACAATTCGAATACCAGTACACATGGTAGAAACGATTAATAAATTGATTCGTGTTCAACGTCAATTATTGCAAGATTTAGGAAGAGATCCAGCTCCTGAAGAAATTGGAGAAGAAATGGATTTACCACCAGAAAAAGTCAGAGAGATTTTAAAAATTGCACAAGAACCCGTTTCATTAGAGACGCCAATTGGTGAAGAAGATGATAGTCATTTAGGAGATTTCATTGAGGACCAAGAAGCTCAAAGTCCATCTGACCATGCAGCATACGAATTGTTAAAAGAACAATTAGAAGATGTTTTAGATACACTTACTGACAGAGAAGAAAATGTTTTACGTTTACGTTTTGGTTTAGATGATGGACGAACAAGAACACTAGAAGAAGTTGGAAAAGTATTCGGTGTAACACGTGAAAGAATTCGTCAGATTGAAGCAAAAGCTTTAAGAAAACTAAGACATCCTAGTCGAAGTAAACGTCTTAAAGATTTCATGGATTAA
PROTEIN sequence
Length: 369
MSDNQVKIKKQTIDPTLTLEDVKKQLIDKGKKEGHLSHEEIAEKLQNFEMDSDQMDDFFDQLNDNDITLVNEKDSSDTDDKINPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIELAKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIGEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD*