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Infant_2_SE_27

Alias: i2.NODE_180_length_38357_cov_61.233673

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_SE_27_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30..581)
DNA (552bp) protein (184aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" s
5-formyltetrahydrofolate cyclo-ligase n=61 Tax=Staphylococcus RepID=C5Q9H3_STAEP
Infant_2_SE_27_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(764..913)
DNA (150bp) protein (50aa)
rpmG; ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
50S ribosomal protein L33 1 n=2 Tax=Staphylococcus RepID=RL331_STAHJ
Infant_2_SE_27_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1018..3057)
DNA (2040bp) protein (680aa)
Penicillin-binding protein 3 n=60 Tax=Staphylococcus RepID=D4FJ32_STAEP
Penicillin-binding protein 3 {ECO:0000313|EMBL:AAW54523.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / R
Cell division protein FtsI [Peptidoglycan synthetase] / Transpeptidase, Penicillin binding protein transpeptidase domain (EC:2.4.1.129)
Infant_2_SE_27_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3564..4163)
DNA (600bp) protein (200aa)
Manganese superoxide dismutase ; Superoxide dismutase [Fe] (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylo
Superoxide dismutase [Mn/Fe] n=281 Tax=Staphylococcus RepID=SODM_STAEQ
Infant_2_SE_27_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4576..4995)
DNA (420bp) protein (140aa)
Ferric uptake regulation protein n=63 Tax=Staphylococcus RepID=FUR_STAEQ
FUR family transcriptional regulator
Ferric uptake regulation protein; Short=Ferric uptake regulator;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 122
Infant_2_SE_27_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4998..5846)
DNA (849bp) protein (283aa)
Zinc ABC transporter, inner membrane permease protein ZnuB
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ12426.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloco
ABC superfamily ATP binding cassette transporter, membrane protein n=4 Tax=Staphylococcus epidermidis RepID=C5QXG0_STAEP
Infant_2_SE_27_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5880..6662)
DNA (783bp) protein (261aa)
Zinc ABC transporter, ATP-binding protein ZnuC
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETJ12427.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
ABC transporter ATP-binding protein n=40 Tax=Staphylococcus RepID=Q8CSE1_STAES
Infant_2_SE_27_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6880..7770)
DNA (891bp) protein (297aa)
Endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000255|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000255|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000255|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000255|HAMA
Probable endonuclease 4 n=50 Tax=Staphylococcus RepID=END4_STAEQ
Infant_2_SE_27_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7780..9126)
DNA (1347bp) protein (449aa)
ATP-dependent RNA helicase YqfR
ATP-dependent RNA helicase, DEAD/DEAH box family {ECO:0000313|EMBL:AAW54537.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (s
ATP-dependent RNA helicase n=61 Tax=Staphylococcus RepID=C5Q9I2_STAEP
Infant_2_SE_27_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9161..10261)
DNA (1101bp) protein (367aa)
FIG060293: Hypothetical protein
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1403935 species="Bacteri
UPF0135 protein SERP1125 n=60 Tax=Staphylococcus RepID=Y1125_STAEQ
Infant_2_SE_27_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10251..10940)
DNA (690bp) protein (230aa)
Putative tRNA-m1A22 methylase
Uncharacterized protein {ECO:0000313|EMBL:EFE59617.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Methyltransferase n=61 Tax=Staphylococcus RepID=C5Q9I4_STAEP
Infant_2_SE_27_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11095..12201)
DNA (1107bp) protein (369aa)
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 1
RNA polymerase sigma factor RpoD n=256 Tax=Staphylococcus RepID=RPOD_STAA8
Infant_2_SE_27_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12472..14268)
DNA (1797bp) protein (599aa)
DNA primase n=59 Tax=Staphylococcus RepID=PRIM_STAEQ
DNA primase {ECO:0000255|HAMAP-Rule:MF_00974}; EC=2.7.7.- {ECO:0000255|HAMAP-Rule:MF_00974};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus
DNA primase (EC:2.7.7.-)
Infant_2_SE_27_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14442..15260)
DNA (819bp) protein (273aa)
ATP/GTP-binding protein, SA1392 homolog
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein 1 n=61 Tax=Staphylococcus RepID=PDRP1_STAEQ
Infant_2_SE_27_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15272..15763)
DNA (492bp) protein (164aa)
ccpN; transcriptional repressor CcpN
CBS domain protein {ECO:0000313|EMBL:AAW54451.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
CBS domain protein n=44 Tax=Staphylococcus RepID=Q5HNY4_STAEQ
Infant_2_SE_27_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16231..17622
DNA (1392bp) protein (464aa)
Glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=258 Tax=Staphylococcus RepID=SYG_STAA1
Infant_2_SE_27_17

Not on your lists

comp(17752..18513)
DNA (762bp) protein (254aa)
recO; DNA repair protein RecO
DNA repair protein RecO {ECO:0000313|EMBL:ETJ18624.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA repair protein RecO n=61 Tax=Staphylococcus RepID=RECO_STAEQ
Infant_2_SE_27_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18539..19012)
DNA (474bp) protein (158aa)
GTP-binding protein Era
GTPase Era {ECO:0000255|HAMAP-Rule:MF_00367}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
GTPase Era n=255 Tax=Staphylococcus RepID=ERA_STAAB
Infant_2_SE_27_19

Not on your lists

comp(19495..19899)
DNA (405bp) protein (135aa)
Cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:ETJ18622.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Cytidine deaminase n=54 Tax=Staphylococcus RepID=C5Q9J2_STAEP
Infant_2_SE_27_20

Not on your lists

comp(19899..20255)
DNA (357bp) protein (119aa)
Diacylglycerol kinase n=61 Tax=Staphylococcus RepID=C5Q9J3_STAEP
dgkA; diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase {ECO:0000313|EMBL:ETJ18621.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Infant_2_SE_27_21

Not on your lists

comp(20257..20724)
DNA (468bp) protein (156aa)
hypothetical protein
Putative rRNA maturation factor {ECO:0000313|EMBL:ETJ18620.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Probable rRNA maturation factor n=61 Tax=Staphylococcus RepID=RRMF_STAEQ
Infant_2_SE_27_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20725..21672)
DNA (948bp) protein (316aa)
Phosphate starvation-inducible protein PhoH,predicted ATPase
PhoH family protein {ECO:0000313|EMBL:AAW54466.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Phosphate starvation-inducible protein PhoH n=60 Tax=Staphylococcus RepID=C5Q9J5_STAEP
Infant_2_SE_27_23

Not on your lists

comp(21958..22641)
DNA (684bp) protein (228aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18618.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Uncharacterized protein n=56 Tax=Staphylococcus RepID=K1UZC1_STAEP
Infant_2_SE_27_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22657..23646)
DNA (990bp) protein (330aa)
hypothetical protein
UPF0365 protein HMPREF0794_0425 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
UPF0365 protein SERP1140 n=70 Tax=Staphylococcus RepID=Y1140_STAEQ
Infant_2_SE_27_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23661..24371)
DNA (711bp) protein (237aa)
hypothetical protein
Nodulation efficiency protein D {ECO:0000313|EMBL:EFE59603.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
ClpP family peptidase S14 family protein n=61 Tax=Staphylococcus RepID=C5Q9J8_STAEP
Infant_2_SE_27_26
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25246..25422)
DNA (177bp) protein (59aa)
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
30S ribosomal protein S21 n=244 Tax=Staphylococcus RepID=RS21_STAA1
Infant_2_SE_27_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25548..26894)
DNA (1347bp) protein (449aa)
hypothetical protein
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFE59601.1}; EC=1.8.-.- {ECO:0000313|EMBL:EFE59601.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
2-methylthioadenine synthase n=65 Tax=Staphylococcus RepID=C5Q9K0_STAEP
Infant_2_SE_27_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26900..27637)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyl
Ribosomal RNA small subunit methyltransferase E n=61 Tax=Staphylococcus RepID=C5Q9K1_STAEP
Infant_2_SE_27_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27654..28592)
DNA (939bp) protein (313aa)
prmA; ribosomal protein L11 methyltransferase
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=176279 species="Bact
Ribosomal protein L11 methyltransferase n=61 Tax=Staphylococcus RepID=PRMA_STAEQ
Infant_2_SE_27_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28596..29717)
DNA (1122bp) protein (374aa)
Chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epide
Chaperone protein DnaJ n=71 Tax=Staphylococcus RepID=DNAJ_STAEQ
Displaying items 1-30 of 38 in total

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