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Infant_2_SW_12

Alias: i4.NODE_1367_length_37457_cov_32.914997

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_SW_12_1
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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184..1062
DNA (879bp) protein (293aa)
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales;
Elongation factor Ts n=67 Tax=Staphylococcus RepID=EFTS_STAEQ
Infant_2_SW_12_2
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1203..1925
DNA (723bp) protein (241aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=259 Tax=Staphylococcaceae RepID=PYRH_STAA1
Infant_2_SW_12_3
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1941..2495
DNA (555bp) protein (185aa)
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1194526 species="Bacteria;
Ribosome-recycling factor n=14 Tax=Staphylococcus RepID=RRF_STAHJ
Infant_2_SW_12_4
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2662..3498
DNA (837bp) protein (279aa)
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Stap
Isoprenyl transferase n=2 Tax=Staphylococcus warneri RepID=C4W8J2_STAWA
Infant_2_SW_12_5
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3502..4284
DNA (783bp) protein (261aa)
phosphatidate cytidylyltransferase rbh
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" so
Phosphatidate cytidylyltransferase n=66 Tax=Staphylococcus RepID=CDSA_STAEQ
Infant_2_SW_12_6
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4527..5813
DNA (1287bp) protein (429aa)
zinc metalloprotease
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylo
RIP metalloprotease RseP n=2 Tax=Staphylococcus warneri RepID=C4W8J0_STAWA
Infant_2_SW_12_7
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5833..7536
DNA (1704bp) protein (568aa)
prolyl-tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=2 Tax=Staphylococcus warneri RepID=C4W8I9_STAWA
Infant_2_SW_12_8
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7762..12114
DNA (4353bp) protein (1451aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1194526 species="Bacteria; Firmicu
polC; DNA polymerase III PolC (EC:2.7.7.7) rbh
DNA polymerase III PolC-type n=243 Tax=Staphylococcus RepID=DPO3_STAES
Infant_2_SW_12_9
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12297..12764
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1358412 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae;
ribosome maturation protein RimP rbh
Ribosome maturation factor RimP n=2 Tax=Staphylococcus warneri RepID=C4W8I7_STAWA
Infant_2_SW_12_10
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12785..14017
DNA (1233bp) protein (411aa)
nusA; transcription elongation factor NusA rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus war
Transcription termination-antitermination factor n=68 Tax=Staphylococcus RepID=Q4L5W8_STAHJ
Infant_2_SW_12_11
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14037..14324
DNA (288bp) protein (96aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC90774.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Uncharacterized protein n=173 Tax=Staphylococcus RepID=C8LKE7_STAAU
Infant_2_SW_12_12
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14321..14638
DNA (318bp) protein (106aa)
putative ribosomal protein
Putative ribosomal protein {ECO:0000313|EMBL:AGC90773.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
30S ribosomal protein L7 Ae n=2 Tax=Staphylococcus warneri RepID=C4W8I4_STAWA
Infant_2_SW_12_13
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14643..16808
DNA (2166bp) protein (722aa)
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl
infB; translation initiation factor IF-2 rbh
Translation initiation factor IF-2 n=103 Tax=Staphylococcus RepID=IF2_STAEQ
Infant_2_SW_12_14
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16948..17298
DNA (351bp) protein (117aa)
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=596319 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus wa
rbfA; ribosome-binding factor A
Ribosome-binding factor A n=1 Tax=Staphylococcus caprae C87 RepID=E5CQY0_9STAP
Infant_2_SW_12_15
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17451..18368
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase B
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=2 Tax=Staphylococcus warneri RepID=C4W8I1_STAWA
Infant_2_SW_12_16
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18381..19352
DNA (972bp) protein (324aa)
ribF; riboflavin biosynthesis protein RibF
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1276282 species="Bacteria; Firmicutes;
Riboflavin biosynthesis protein RibF n=2 Tax=Staphylococcus warneri RepID=C4W8I0_STAWA
Infant_2_SW_12_17
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


19466..19735
DNA (270bp) protein (90aa)
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus w
30S ribosomal protein S15 n=254 Tax=Staphylococcus RepID=RS15_STAA1
Infant_2_SW_12_18
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19871..21970
DNA (2100bp) protein (700aa)
polynucleotide phosphorylase/polyadenylase
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=119452
Polyribonucleotide nucleotidyltransferase n=252 Tax=Staphylococcus RepID=PNP_STAEQ
Infant_2_SW_12_19
unknown

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21939..22052
DNA (114bp) protein (38aa)
0
Infant_2_SW_12_20
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22157..23830
DNA (1674bp) protein (558aa)
Ribonuclease J {ECO:0000256|PIRNR:PIRNR004803}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR004803};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus
ribonuclease
Ribonuclease J 2 n=250 Tax=Staphylococcus RepID=RNJ2_STAA3
Infant_2_SW_12_21
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24070..26466
DNA (2397bp) protein (799aa)
DNA translocase FtsK
DNA translocase FtsK {ECO:0000313|EMBL:AGC90765.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
DNA translocase ftsk n=2 Tax=Staphylococcus warneri RepID=C4W8H5_STAWA
Infant_2_SW_12_22
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26469..27182
DNA (714bp) protein (238aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGC90764.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Transcription regulator GntR family protein n=2 Tax=Staphylococcus warneri RepID=C4W8H4_STAWA
Infant_2_SW_12_23
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27195..28481
DNA (1287bp) protein (429aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGC90763.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
M16 family metallopeptidase n=2 Tax=Staphylococcus warneri RepID=C4W8H3_STAWA
Infant_2_SW_12_24
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28481..29770
DNA (1290bp) protein (430aa)
M16 family peptidase
M16 family peptidase {ECO:0000313|EMBL:AGC90762.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Precessing proteinase n=2 Tax=Staphylococcus warneri RepID=C4W8H2_STAWA
Infant_2_SW_12_25
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29767..30471
DNA (705bp) protein (235aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Staphylococcus warneri VCU121 RepID=F3SNV3_STAWA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC90761.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Infant_2_SW_12_26
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30606..31442
DNA (837bp) protein (279aa)
ACT domain-containing protein
ACT domain-containing protein {ECO:0000313|EMBL:AGC90760.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
ACT domain protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W8H0_STAWA
Infant_2_SW_12_27
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31463..31855
DNA (393bp) protein (131aa)
Cro/CI family transcriptional regulator
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:AGC90759.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;
Transcriptional regulator, Cro/CI family n=2 Tax=Staphylococcus warneri RepID=F3SNV0_STAWA
Infant_2_SW_12_28
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31886..32461
DNA (576bp) protein (192aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AGC90758.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloco
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Staphylococcus warneri RepID=C4W8G8_STAWA
Infant_2_SW_12_29
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32634..33785
DNA (1152bp) protein (384aa)
competence/damage-inducible protein CinA
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (stra
Putative competence-damage inducible protein n=2 Tax=Staphylococcus warneri RepID=F3SNU8_STAWA
Infant_2_SW_12_30
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


33952..34998
DNA (1047bp) protein (349aa)
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=596319 species="Bacteria; Firmicute
Protein RecA n=279 Tax=Staphylococcus RepID=RECA_STACT
Displaying items 1-30 of 32 in total

View Taxonomy