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Infant_2_AS_4

Alias: i3.NODE_162_length_32660_cov_52.037663

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_2_AS_4_1
unknown

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)

This feature has no annotations

Infant_2_AS_4_2
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(271..1092)
DNA (822bp) protein (274aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EFW10234.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EFW10234.1};; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" so
Exodeoxyribonuclease III n=2 Tax=Actinomyces RepID=E8JGZ0_9ACTO
exodeoxyribonuclease III
Infant_2_AS_4_3
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1249..2256
DNA (1008bp) protein (336aa)
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ERH33608.1}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp
Putative zinc transporter ZitB n=2 Tax=Actinomyces RepID=J0NL73_9ACTO
cation diffusion facilitator family transporter
Infant_2_AS_4_4
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2273..3184)
DNA (912bp) protein (304aa)
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;
Bifunctional protein FolD n=5 Tax=Actinobacteria RepID=A7B9A9_9ACTO
folD; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Infant_2_AS_4_5
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3181..4473)
DNA (1293bp) protein (431aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=2 Tax=Actinomyces RepID=K0YQA9_9ACTO
glycine hydroxymethyltransferase (EC:2.1.2.1)
Infant_2_AS_4_6
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4676..5554)
DNA (879bp) protein (293aa)
Formyltetrahydrofolate deformylase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6XC22_9ACTO
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=888050 species="Ba
formyltetrahydrofolate deformylase (EC:3.5.1.10)
Infant_2_AS_4_7
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5677..7005)
DNA (1329bp) protein (443aa)
Amino acid amidohydrolase {ECO:0000313|EMBL:KGF06019.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
Indole-3-acetyl-L-aspartic acid hydrolase n=2 Tax=Corynebacterium glucuronolyticum RepID=C2GFD4_9CORY
amidohydrolase
Infant_2_AS_4_8
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7015..8514)
DNA (1500bp) protein (500aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF06020.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
Anaerobic C4-dicarboxylate transporter DcuC n=11 Tax=Pasteurella multocida RepID=H8IFX6_PASMH
anaerobic c4-dicarboxylate antiporter, DcuC family
Infant_2_AS_4_9
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8717..9706)
DNA (990bp) protein (330aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=883077 species="Bacteria; Ac
Malate dehydrogenase n=10 Tax=Actinobacteria RepID=D4TYD1_9ACTO
malate dehydrogenase (EC:1.1.1.82)
Infant_2_AS_4_10
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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9934..11085
DNA (1152bp) protein (384aa)
PPK2 family polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:EJZ85676.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinom
PPK2 family polyphosphate:nucleotide phosphotransferase n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQB7_9ACTO
hypothetical protein
Infant_2_AS_4_11
unknown

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11343..11546
DNA (204bp) protein (68aa)

This feature has no annotations

Infant_2_AS_4_12
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11816..13558)
DNA (1743bp) protein (581aa)
Glucose-6-phosphate isomerase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PI55_9ACTO
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Infant_2_AS_4_13
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13607..15967)
DNA (2361bp) protein (787aa)
6-phosphofructokinase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PHB1_9ACTO
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00016842}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00016842};; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;"
pfkL; 6-phosphofructokinase (EC:2.7.1.11)
Infant_2_AS_4_14
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16749..17966)
DNA (1218bp) protein (406aa)
isocitrate dehydrogenase, NADP-dependent
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulo
Isocitrate dehydrogenase [NADP] n=3 Tax=Cellulomonas RepID=D5UI71_CELFN
Infant_2_AS_4_15
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18176..18496)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY15127.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PI92_9ACTO
Infant_2_AS_4_16
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18800..20302
DNA (1503bp) protein (501aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:CRH63433.1}; EC=2.3.1.8 {ECO:0000313|EMBL:CRH63433.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila grou
Phosphate acetyltransferase n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YPJ5_9ACTO
phosphate acetyltransferase
Infant_2_AS_4_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20394..21599
DNA (1206bp) protein (402aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinom
Acetate kinase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YP56_9ACTO
acetate kinase
Infant_2_AS_4_18
unknown

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21634..21789
DNA (156bp) protein (52aa)

This feature has no annotations

Infant_2_AS_4_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21780..22193
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI82060.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Sugar transporter n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6WEU1_9ACTO
Infant_2_AS_4_20
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22254..23597)
DNA (1344bp) protein (448aa)
Uncharacterized protein {ECO:0000313|EMBL:EPD30967.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.
Predicted protein n=2 Tax=Streptomyces roseosporus NRRL 15998 RepID=D6AB15_STRFL
major facilitator superfamily permease
Infant_2_AS_4_21
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23897..25285)
DNA (1389bp) protein (463aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1219581 species="Bacteria; Acti
fumarate lyase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) RepID=D7BK42_ARCHD
Infant_2_AS_4_22
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25446..26489)
DNA (1044bp) protein (348aa)
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AJF68964.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamen
LacI-family transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I5A1_9ACTO
Infant_2_AS_4_23
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26819..30082
DNA (3264bp) protein (1088aa)
Uncharacterized protein {ECO:0000313|EMBL:EJZ87939.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z6U4_9ACTO
alkaline phosphatase
Infant_2_AS_4_24
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(30368..31492)
DNA (1125bp) protein (375aa)
Inosine-5`-monophosphate dehydrogenase {ECO:0000313|EMBL:CRH64256.1}; EC=1.-.-.- {ECO:0000313|EMBL:CRH64256.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamyd
IMP dehydrogenase n=7 Tax=Actinomyces RepID=E6KUB7_9ACTO
inosine 5-monophosphate dehydrogenase
Infant_2_AS_4_25
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31701..32408
DNA (708bp) protein (236aa)
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:ENO18767.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ENO18767.1};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomy
DNA polymerase III subunit epsilon n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X5Y0_9ACTO
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Displaying 25 items

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