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Infant_1_CR_1

Alias: scaffold_5

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Displaying items 1-30 of 281 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_CR_1_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..496
DNA (495bp) protein (165aa)
Transposase {ECO:0000313|EMBL:EGX70745.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinase XerD
Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNI9_9CLOT
Infant_1_CR_1_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

538..669
DNA (132bp) protein (44aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25247.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Y5_9FIRM
Infant_1_CR_1_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(851..2251)
DNA (1401bp) protein (467aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35340.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Glycosyl hydrolase, family 1 n=4 Tax=Erysipelotrichaceae RepID=B0N794_9FIRM
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Infant_1_CR_1_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2341..4149)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=5 Tax=Erysipelotrichaceae RepID=B0N793_9FIRM
elongation factor 4
Infant_1_CR_1_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4210..4545)
DNA (336bp) protein (112aa)
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmenta
Single-stranded DNA-binding protein n=4 Tax=Erysipelotrichaceae RepID=C3RL75_9FIRM
single-stranded DNA-binding protein
Infant_1_CR_1_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5107..7188)
DNA (2082bp) protein (694aa)
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHM90131.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillu
Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N791_9FIRM
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Infant_1_CR_1_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7209..9473)
DNA (2265bp) protein (755aa)
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS17678.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.
Diguanylate cyclase (GGDEF) domain-containing protein n=4 Tax=Erysipelotrichaceae RepID=G9R4U5_9FIRM
diguanylate cyclase (GGDEF) domain
Infant_1_CR_1_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9763..10098)
DNA (336bp) protein (112aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00102137}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
Holo-[acyl-carrier-protein] synthase n=4 Tax=Erysipelotrichaceae RepID=C3RL71_9FIRM
acpS; holo-[acyl-carrier-protein] synthase (EC:2.7.8.7)
Infant_1_CR_1_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10101..10769)
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ32323.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N788_9FIRM
Infant_1_CR_1_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10787..11386)
DNA (600bp) protein (200aa)
tRNA binding domain protein {ECO:0000313|EMBL:EDS17675.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erys
tRNA binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N787_9FIRM
tRNA-binding protein
Infant_1_CR_1_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11398..11718)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90126.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Thioredoxin n=4 Tax=Erysipelotrichaceae RepID=C3RL68_9FIRM
thiol-disulfide isomerase and thioredoxin
Infant_1_CR_1_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11711..12364)
DNA (654bp) protein (218aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=4 Tax=Erysipelotrichaceae RepID=B0N785_9FIRM
trmB; tRNA (guanine-N(7)-)-methyltransferase
Infant_1_CR_1_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12397..13116)
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichac
Pseudouridine synthase n=3 Tax=Erysipelotrichaceae RepID=B0N784_9FIRM
pseudouridine synthase
Infant_1_CR_1_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13100..13591)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ32317.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N783_9FIRM
Infant_1_CR_1_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13735..13884)
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ32316.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N782_9FIRM
Infant_1_CR_1_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13953..14126)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ32315.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N781_9FIRM
Infant_1_CR_1_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14165..15043)
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90178.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Aldose 1-epimerase n=4 Tax=Erysipelotrichaceae RepID=B0N780_9FIRM
lacX; protein LacX, chromosomal
Infant_1_CR_1_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15045..16184)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=445974 species=
N-acetylglucosamine-6-phosphate deacetylase n=4 Tax=Erysipelotrichaceae RepID=C3RL65_9FIRM
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
Infant_1_CR_1_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16663..17010)
DNA (348bp) protein (116aa)
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copro
Ribosome-binding factor A n=4 Tax=Erysipelotrichaceae RepID=B0N778_9FIRM
ribosome-binding factor A
Infant_1_CR_1_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17020..18873)
DNA (1854bp) protein (618aa)
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichace
Translation initiation factor IF-2 n=5 Tax=Erysipelotrichaceae RepID=B0N777_9FIRM
infB; translation initiation factor IF-2
Infant_1_CR_1_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18878..19174)
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90174.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
50S ribosomal protein L7 n=4 Tax=Erysipelotrichaceae RepID=C3RL62_9FIRM
hypothetical protein
Infant_1_CR_1_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19167..19424)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS17663.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipel
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N775_9FIRM
hypothetical protein
Infant_1_CR_1_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19437..20783)
DNA (1347bp) protein (449aa)
Transcription termination factor NusA n=4 Tax=Erysipelotrichaceae RepID=B0N774_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprob
nusA; transcription elongation factor NusA
Infant_1_CR_1_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20796..21263)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae
Ribosome maturation factor RimP n=4 Tax=Erysipelotrichaceae RepID=C3RL59_9FIRM
hypothetical protein
Infant_1_CR_1_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21362..25684)
DNA (4323bp) protein (1441aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=469597 species="Bacteria; Firmicut
DNA polymerase III PolC-type n=4 Tax=Erysipelotrichaceae RepID=B0N772_9FIRM
polC; DNA polymerase III PolC
Infant_1_CR_1_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25760..26839)
DNA (1080bp) protein (360aa)
RIP metalloprotease RseP {ECO:0000313|EMBL:EHQ47064.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp
RIP metalloprotease RseP n=4 Tax=Erysipelotrichaceae RepID=B0N771_9FIRM
membrane-associated zinc metalloprotease
Infant_1_CR_1_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26839..27990)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=4 Tax=Erysipelotrichaceae RepID=C3RL56_9FIRM
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
Infant_1_CR_1_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27992..28774)
DNA (783bp) protein (261aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Ery
Phosphatidate cytidylyltransferase n=4 Tax=Erysipelotrichaceae RepID=B0N769_9FIRM
phosphatidate cytidylyltransferase
Infant_1_CR_1_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28774..29529)
DNA (756bp) protein (252aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrich
Isoprenyl transferase n=3 Tax=Coprobacillus RepID=C3RL54_9FIRM
Di-trans,poly-cis-decaprenylcistransferase
Infant_1_CR_1_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29826..30107)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:EHQ47068.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N766_9FIRM
DNA-binding SAP domain-containing protein
Displaying items 1-30 of 281 in total

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