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Infant_1_CR_20

Alias: scaffold_79

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_CR_20_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..77)
DNA (75bp) protein (25aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90841.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Putative uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R3H2_9FIRM
Infant_1_CR_20_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(70..768)
DNA (699bp) protein (233aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90842.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
LytTr DNA-binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N250_9FIRM
two-component response regulator, LytR/AlgR family
Infant_1_CR_20_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1123..1602)
DNA (480bp) protein (160aa)
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHM90843.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" sour
PTS system, glucose subfamily, IIA component n=4 Tax=Erysipelotrichaceae RepID=B0N249_9FIRM
PTS system, alpha-glucoside-specific IIBC subunit (EC:2.7.1.69)
Infant_1_CR_20_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1659..2423
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ36778.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Transcriptional regulator, RpiR family n=4 Tax=Erysipelotrichaceae RepID=B0N248_9FIRM
RpiR family transcriptional regulator
Infant_1_CR_20_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2423..3175
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ36777.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Transcriptional regulator, RpiR family n=4 Tax=Erysipelotrichaceae RepID=B0N247_9FIRM
RpiR family transcriptional regulator
Infant_1_CR_20_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3193..4719)
DNA (1527bp) protein (509aa)
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EHM90846.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Co
PTS system n=4 Tax=Erysipelotrichaceae RepID=C3RP08_9FIRM
PTS system transporter subunit IIC
Infant_1_CR_20_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4740..6065)
DNA (1326bp) protein (442aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90847.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Family 4 glycosyl hydrolase n=4 Tax=Erysipelotrichaceae RepID=B0N245_9FIRM
glycoside hydrolase
Infant_1_CR_20_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6456..7412)
DNA (957bp) protein (319aa)
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EDS19804.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelato
Transporter, auxin efflux carrier (AEC) family protein n=4 Tax=Erysipelotrichaceae RepID=B0N244_9FIRM
putative auxin efflux carrier
Infant_1_CR_20_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7555..8739
DNA (1185bp) protein (395aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=469597 specie
Transcription termination factor Rho n=4 Tax=Erysipelotrichaceae RepID=B0N243_9FIRM
transcription termination factor Rho
Infant_1_CR_20_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8985..10175)
DNA (1191bp) protein (397aa)
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDS19802.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridi
Transporter, major facilitator family protein n=4 Tax=Erysipelotrichaceae RepID=B0N242_9FIRM
Arabinose efflux permease
Infant_1_CR_20_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10241..10603)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:EHQ45296.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
MerR-family transcriptional regulator n=4 Tax=Erysipelotrichaceae RepID=C3RP13_9FIRM
regulatory protein MerR
Infant_1_CR_20_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10587..10892)
DNA (306bp) protein (102aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N240_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36770.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Infant_1_CR_20_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10951..11472)
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90853.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Acetyltransferase, GNAT family n=4 Tax=Erysipelotrichaceae RepID=B0N239_9FIRM
acetyltransferase
Infant_1_CR_20_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11516..12115)
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ36768.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
R3H domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N238_9FIRM
Jag protein
Infant_1_CR_20_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12124..13020)
DNA (897bp) protein (299aa)
YidC/Oxa1 family membrane protein insertase {ECO:0000313|EMBL:CCZ36767.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; enviro
Membrane protein insertase, YidC/Oxa1 family n=4 Tax=Erysipelotrichaceae RepID=B0N237_9FIRM
spoIIIJ; stage III sporulation protein J
Infant_1_CR_20_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13021..13359)
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
Ribonuclease P protein component n=4 Tax=Erysipelotrichaceae RepID=B0N236_9FIRM
rnpA; ribonuclease P (EC:3.1.26.5)
Infant_1_CR_20_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(13400..13534)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysi
50S ribosomal protein L34 n=7 Tax=Erysipelotrichaceae RepID=B0N235_9FIRM
rpmH; 50S ribosomal protein L34
Infant_1_CR_20_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14224..15570
DNA (1347bp) protein (449aa)
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus;
Chromosomal replication initiator protein DnaA n=6 Tax=Erysipelotrichaceae RepID=B0N234_9FIRM
dnaA; chromosomal replication initiation protein
Infant_1_CR_20_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15726..16835
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=445974 species="Bacter
DNA polymerase III subunit beta n=4 Tax=Erysipelotrichaceae RepID=B0N233_9FIRM
dnaN; DNA polymerase III subunit beta
Infant_1_CR_20_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17045..17251
DNA (207bp) protein (69aa)
S4 domain-containing protein YaaA {ECO:0000313|EMBL:CCZ32935.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental sa
S4 domain protein YaaA n=4 Tax=Erysipelotrichaceae RepID=B0N232_9FIRM
hypothetical protein
Infant_1_CR_20_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17251..18348
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotri
DNA replication and repair protein RecF n=4 Tax=Erysipelotrichaceae RepID=B0N231_9FIRM
recF; recombination protein F
Infant_1_CR_20_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18348..20273
DNA (1926bp) protein (642aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262853 species="Bacteria; F
DNA gyrase subunit B n=5 Tax=Erysipelotrichaceae RepID=C3RP25_9FIRM
gyrB; DNA gyrase subunit B
Infant_1_CR_20_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


20291..22750
DNA (2460bp) protein (820aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotric
DNA gyrase subunit A n=5 Tax=Erysipelotrichaceae RepID=B1C5H9_9FIRM
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
Infant_1_CR_20_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22804..23313
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:EHQ45283.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Acetyltransferase, GNAT family n=4 Tax=Erysipelotrichaceae RepID=B0N228_9FIRM
hypothetical protein
Infant_1_CR_20_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23339..23725)
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ32940.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Predicted protein n=4 Tax=Erysipelotrichaceae RepID=C3RP28_9FIRM
HAD-superfamily hydrolase
Infant_1_CR_20_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23740..23982)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ32941.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Predicted protein n=4 Tax=Erysipelotrichaceae RepID=C3RP29_9FIRM
HAD-superfamily hydrolase, subfamily IIB
Infant_1_CR_20_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23979..24323)
DNA (345bp) protein (115aa)
Transcriptional regulator {ECO:0000313|EMBL:CCZ32942.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;"
Transcriptional regulator n=3 Tax=Coprobacillus RepID=C3RP30_9FIRM
MerR family transcriptional regulator
Infant_1_CR_20_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24345..24689)
DNA (345bp) protein (115aa)
Methyltransferase domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N224_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDS19784.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source=
Methylase involved in ubiquinone/menaquinone biosynthesis
Infant_1_CR_20_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25045..26550
DNA (1506bp) protein (502aa)
Na+:H+ antiporter nhaC n=4 Tax=Erysipelotrichaceae RepID=C3RP31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33039.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
transporter, NhaC family (TC 2.A.35)
Infant_1_CR_20_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26612..29554
DNA (2943bp) protein (981aa)
PAS domain S-box protein {ECO:0000313|EMBL:EDS19782.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipe
PAS domain S-box protein n=4 Tax=Erysipelotrichaceae RepID=B0N222_9FIRM
diguanylate cyclase/phosphodiesterase
Displaying items 1-30 of 61 in total

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