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Infant_1_CR_24

Alias: scaffold_86

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Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_CR_24_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7..213)
DNA (207bp) protein (69aa)
Excisionase transposon {ECO:0000313|EMBL:EGX70744.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA binding domain, excisionase family n=46 Tax=root RepID=B1C4S8_9FIRM
Excisionase from transposon Tn916.
Infant_1_CR_24_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(206..1348)
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:EGX70743.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Transcriptional regulator, Cro/CI family n=18 Tax=root RepID=E2SHM3_9FIRM
hypothetical protein
Infant_1_CR_24_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1872..2492
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:EGX70742.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Transcriptional regulator
DNA-binding helix-turn-helix protein n=6 Tax=Firmicutes RepID=E4LT07_9CLOT
Infant_1_CR_24_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3008..3970
DNA (963bp) protein (321aa)
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDR46469.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATC
Transcriptional regulator, AraC family n=4 Tax=Firmicutes RepID=B0G9W5_9FIRM
transcriptional regulator, AraC family
Infant_1_CR_24_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4103..5917
DNA (1815bp) protein (605aa)
ABC transporter {ECO:0000313|EMBL:EFW05230.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC-type multidrug transport system, ATPase and permease components
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=B0P206_9CLOT
Infant_1_CR_24_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5923..7656
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR46467.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC
ABC-type multidrug transport system, ATPase and permease components
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=B0P205_9CLOT
Infant_1_CR_24_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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7695..8078
DNA (384bp) protein (128aa)
Iron dependent repressor DNA binding domain protein n=3 Tax=Firmicutes RepID=B0G9W2_9FIRM
Iron dependent repressor, DNA binding domain protein {ECO:0000313|EMBL:EKY23607.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anae
Mn-dependent transcriptional regulator
Infant_1_CR_24_8
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8170..8430)
DNA (261bp) protein (87aa)
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY23608.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus
Helix-turn-helix.
DNA-binding helix-turn-helix protein n=4 Tax=Clostridiales RepID=B0P203_9CLOT
Infant_1_CR_24_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8861..9421
DNA (561bp) protein (187aa)
Relatives found in conjugative transposons {ECO:0000313|EMBL:CDF47166.1}; Sigma-70 region 4 protein {ECO:0000313|EMBL:CDF47153.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
putative conjugative transposon
Conjugative transposon protein n=9 Tax=Firmicutes RepID=C3RNS5_9FIRM
Infant_1_CR_24_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9426..9665
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS75859.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostri
putative conjugative transposon protein
Predicted protein n=10 Tax=Firmicutes RepID=C3RNS4_9FIRM
Infant_1_CR_24_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9957..12068
DNA (2112bp) protein (704aa)
Penicillin-binding protein, transpeptidase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N795_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35339.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
hypothetical protein
Infant_1_CR_24_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


12141..12290
DNA (150bp) protein (50aa)
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacill
50S ribosomal protein L33 n=5 Tax=Erysipelotrichaceae RepID=C3RL79_9FIRM
LSU ribosomal protein L33P
Infant_1_CR_24_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12327..12944
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:EHQ47038.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Metallo-beta-lactamase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N797_9FIRM
hypothetical protein
Infant_1_CR_24_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12983..13150)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS17686.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipel
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N798_9FIRM
transposase
Infant_1_CR_24_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13240..13617)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35327.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Transposase n=4 Tax=Erysipelotrichaceae RepID=C3RL81_9FIRM
Transposase and inactivated derivatives
Infant_1_CR_24_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13943..16714
DNA (2772bp) protein (924aa)
Putative esterase n=3 Tax=Erysipelotrichaceae RepID=B0N7A0_9FIRM
Putative esterase {ECO:0000313|EMBL:EDS17688.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclo
esterase
Infant_1_CR_24_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17179..17421
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS17689.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipel
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N7A1_9FIRM
Infant_1_CR_24_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17706..18713
DNA (1008bp) protein (336aa)
Type II/IV secretion system protein {ECO:0000313|EMBL:EDS17690.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" sour
Type II/IV secretion system protein n=4 Tax=Erysipelotrichaceae RepID=B0N7A2_9FIRM
hypothetical protein
Infant_1_CR_24_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18706..19707
DNA (1002bp) protein (334aa)
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EDS17691.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclo
Bacterial type II secretion system domain protein F n=4 Tax=Erysipelotrichaceae RepID=B0N7A3_9FIRM
competence protein
Infant_1_CR_24_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19720..20025
DNA (306bp) protein (102aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CCZ35318.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrich
ComG operon protein 3 n=4 Tax=Erysipelotrichaceae RepID=B0N7A4_9FIRM
competence protein ComGC
Infant_1_CR_24_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20015..20422
DNA (408bp) protein (136aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CCZ35317.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrich
Prepilin-type cleavage/methylation N-terminal domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N7A5_9FIRM
Infant_1_CR_24_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20412..20633
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35315.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Predicted protein n=4 Tax=Erysipelotrichaceae RepID=C3RL89_9FIRM
Infant_1_CR_24_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20585..21046
DNA (462bp) protein (154aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=3 Tax=Erysipelotrichaceae RepID=G9R778_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CCZ35313.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrich
Infant_1_CR_24_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21024..21404
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35311.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N7A8_9FIRM
Infant_1_CR_24_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21480..22037
DNA (558bp) protein (186aa)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichac
Elongation factor P n=5 Tax=Erysipelotrichaceae RepID=B0N7A9_9FIRM
efp; translation elongation factor P
Infant_1_CR_24_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22117..22587
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35291.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N7B0_9FIRM
spoIIIAH; stage III sporulation protein AH
Infant_1_CR_24_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22611..22976
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS17699.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipel
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N7B1_9FIRM
hypothetical protein
Infant_1_CR_24_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23081..23485
DNA (405bp) protein (135aa)
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; enviro
Transcription antitermination factor NusB n=4 Tax=Erysipelotrichaceae RepID=B0N7B2_9FIRM
nusB; transcription antitermination factor NusB
Infant_1_CR_24_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23485..24801
DNA (1317bp) protein (439aa)
Exodeoxyribonuclease 7 large subunit n=4 Tax=Erysipelotrichaceae RepID=B0N7B3_9FIRM
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
exodeoxyribonuclease VII large subunit
Infant_1_CR_24_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24812..25027
DNA (216bp) protein (72aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=4 Tax=Erysipelotrichaceae RepID=C3RL95_9FIRM
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Displaying items 1-30 of 124 in total

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