ggKbase home page

Infant_1_CR_25

Alias: scaffold_89

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_CR_25_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3..770
DNA (768bp) protein (256aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM90045.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Multimeric flavodoxin wrbA family protein n=4 Tax=Erysipelotrichaceae RepID=C3RPI0_9FIRM
NADPH-dependent FMN reductase
Infant_1_CR_25_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

781..1368
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ33328.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Phosphoglycerate mutase n=4 Tax=Erysipelotrichaceae RepID=C3RPI1_9FIRM
pgm; phosphoglycerate mutase (EC:5.4.2.1)
Infant_1_CR_25_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


1581..1889
DNA (309bp) protein (103aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental sample
30S ribosomal protein S10 n=7 Tax=Erysipelotrichaceae RepID=B0N480_9FIRM
rpsJ; 30S ribosomal protein S10
Infant_1_CR_25_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


1911..2639
DNA (729bp) protein (243aa)
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysip
50S ribosomal protein L3 n=5 Tax=Erysipelotrichaceae RepID=B0N481_9FIRM
50S ribosomal protein L3
Infant_1_CR_25_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


2661..3284
DNA (624bp) protein (208aa)
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples
50S ribosomal protein L4 n=5 Tax=Erysipelotrichaceae RepID=B0N482_9FIRM
50S ribosomal protein L4
Infant_1_CR_25_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


3284..3574
DNA (291bp) protein (97aa)
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copr
50S ribosomal protein L23 n=5 Tax=Erysipelotrichaceae RepID=B0N483_9FIRM
rplW; 50S ribosomal protein L23
Infant_1_CR_25_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


3627..4460
DNA (834bp) protein (278aa)
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Ery
50S ribosomal protein L2 n=5 Tax=Erysipelotrichaceae RepID=B0N484_9FIRM
LSU ribosomal protein L2P
Infant_1_CR_25_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


4479..4757
DNA (279bp) protein (93aa)
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacill
Ribosomal protein S19 n=7 Tax=Erysipelotrichaceae RepID=B0N485_9FIRM
SSU ribosomal protein S19P
Infant_1_CR_25_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


4777..5109
DNA (333bp) protein (111aa)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copro
50S ribosomal protein L22 n=6 Tax=Erysipelotrichaceae RepID=B0N486_9FIRM
rplV; 50S ribosomal protein L22
Infant_1_CR_25_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


5121..5774
DNA (654bp) protein (218aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillu
30S ribosomal protein S3 n=5 Tax=Erysipelotrichaceae RepID=B0N487_9FIRM
30S ribosomal protein S3
Infant_1_CR_25_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


5777..6187
DNA (411bp) protein (137aa)
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysi
50S ribosomal protein L16 n=6 Tax=Erysipelotrichaceae RepID=B0N488_9FIRM
50S ribosomal protein L16
Infant_1_CR_25_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6190..6384
DNA (195bp) protein (65aa)
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Er
50S ribosomal protein L29 n=5 Tax=Erysipelotrichaceae RepID=B0N489_9FIRM
50S ribosomal protein L29
Infant_1_CR_25_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6396..6656
DNA (261bp) protein (87aa)
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacill
30S ribosomal protein S17 n=5 Tax=Erysipelotrichaceae RepID=B0N490_9FIRM
30S ribosomal protein S17
Infant_1_CR_25_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6691..7059
DNA (369bp) protein (123aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copr
50S ribosomal protein L14 n=7 Tax=Erysipelotrichaceae RepID=B0N491_9FIRM
LSU ribosomal protein L14P
Infant_1_CR_25_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7074..7409
DNA (336bp) protein (112aa)
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacill
50S ribosomal protein L24 n=5 Tax=Erysipelotrichaceae RepID=B0N492_9FIRM
rplX; 50S ribosomal protein L24
Infant_1_CR_25_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7426..7965
DNA (540bp) protein (180aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillu
50S ribosomal protein L5 n=5 Tax=Erysipelotrichaceae RepID=C3RPJ5_9FIRM
50S ribosomal protein L5
Infant_1_CR_25_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7983..8168
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae
30S ribosomal protein S14 type Z n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6E3_9FIRM
rpsN; 30S ribosomal protein S14
Infant_1_CR_25_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


8203..8598
DNA (396bp) protein (132aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillu
30S ribosomal protein S8 n=5 Tax=Erysipelotrichaceae RepID=B0N495_9FIRM
rpsH; 30S ribosomal protein S8
Infant_1_CR_25_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


8629..9174
DNA (546bp) protein (182aa)
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysip
50S ribosomal protein L6 n=5 Tax=Erysipelotrichaceae RepID=B0N496_9FIRM
50S ribosomal protein L6
Infant_1_CR_25_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9196..9552
DNA (357bp) protein (119aa)
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental sample
50S ribosomal protein L18 n=4 Tax=Erysipelotrichaceae RepID=B0N497_9FIRM
LSU ribosomal protein L18P
Infant_1_CR_25_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9565..10128
DNA (564bp) protein (188aa)
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copro
30S ribosomal protein S5 n=6 Tax=Erysipelotrichaceae RepID=G9R4X6_9FIRM
rpsE; 30S ribosomal protein S5
Infant_1_CR_25_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10142..10324
DNA (183bp) protein (61aa)
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copro
50S ribosomal protein L30 n=5 Tax=Erysipelotrichaceae RepID=B0N499_9FIRM
LSU ribosomal protein L30P
Infant_1_CR_25_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10339..10779
DNA (441bp) protein (147aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copro
50S ribosomal protein L15 n=5 Tax=Erysipelotrichaceae RepID=B0N4A0_9FIRM
rplO; 50S ribosomal protein L15
Infant_1_CR_25_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10781..12082
DNA (1302bp) protein (434aa)
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichacea
Protein translocase subunit SecY n=5 Tax=Erysipelotrichaceae RepID=B0N4A1_9FIRM
secY; preprotein translocase subunit SecY
Infant_1_CR_25_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12106..12753
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS000796
Adenylate kinase n=5 Tax=Erysipelotrichaceae RepID=B0N4A2_9FIRM
adenylate kinase
Infant_1_CR_25_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12753..13499
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=5 Tax=Erysipelotrichaceae RepID=B0N4A3_9FIRM
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Infant_1_CR_25_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13520..13741
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environment
Translation initiation factor IF-1 n=5 Tax=Erysipelotrichaceae RepID=B0N4A4_9FIRM
translation initiation factor 1
Infant_1_CR_25_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13773..13886
DNA (114bp) protein (38aa)
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copro
50S ribosomal protein L36
50S ribosomal protein L36 n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=E6U8I6_ETHHY
Infant_1_CR_25_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


13913..14278
DNA (366bp) protein (122aa)
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Er
30S ribosomal protein S13 n=5 Tax=Erysipelotrichaceae RepID=B0N4A5_9FIRM
rpsM; 30S ribosomal protein S13
Infant_1_CR_25_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


14298..14690
DNA (393bp) protein (131aa)
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacill
30S ribosomal protein S11 n=7 Tax=Erysipelotrichaceae RepID=E7GG19_9FIRM
30S ribosomal protein S11
Displaying items 1-30 of 63 in total

View Taxonomy