ggKbase home page

Infant_1_EC_28

Alias: scaffold_139

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_EC_28_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

488..844
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:ESA64617.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
Putative uncharacterized protein n=1 Tax=Pectobacterium atrosepticum SCRI1043 RepID=Q6D1Q1_ERWCT
Infant_1_EC_28_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1579..1812
DNA (234bp) protein (78aa)
pptA; 4-oxalocrotonate tautomerase
Tautomerase PptA {ECO:0000256|HAMAP-Rule:MF_00718}; EC=5.3.2.- {ECO:0000256|HAMAP-Rule:MF_00718};; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Tautomerase PptA n=325 Tax=Escherichia RepID=PPTA_ECO24
Infant_1_EC_28_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1809..2378)
DNA (570bp) protein (190aa)
hypothetical protein rbh
Protein YddH {ECO:0000313|EMBL:AJE55851.1}; Strain O157 SvETEC scaffold42.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ44686.1}; Uncharacterized protein {ECO:0000313|EMBL:KHI86210.1}; TaxID=5
Uncharacterized protein YddH n=424 Tax=Enterobacteriaceae RepID=YDDH_ECOLI
Infant_1_EC_28_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2551..3396
DNA (846bp) protein (282aa)
N-acetyltransferase {ECO:0000313|EMBL:ESA64622.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
nhoA; N-hydroxyarylamine O-acetyltransferase (EC:2.3.1.118)
N-hydroxyarylamine O-acetyltransferase n=317 Tax=Enterobacteriaceae RepID=NHOA_ECOLI
Infant_1_EC_28_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3492..4385)
DNA (894bp) protein (298aa)
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:ESA64623.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
yddE; hypothetical protein rbh
Uncharacterized isomerase YddE n=442 Tax=Enterobacteriaceae RepID=YDDE_ECO57
Infant_1_EC_28_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4464..5144)
DNA (681bp) protein (227aa)
narV; nitrate reductase 2 subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:EMX40938.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EMX40938.1};; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Respiratory nitrate reductase 2 gamma chain n=535 Tax=Enterobacteriaceae RepID=NARV_ECO57
Infant_1_EC_28_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5141..5836)
DNA (696bp) protein (232aa)
narJ; nitrate reductase molybdenum cofactor assembly chaperone protein NarJ
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:ESA64625.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Probable nitrate reductase molybdenum cofactor assembly chaperone NarW n=74 Tax=Escherichia RepID=NARW_ECOLI
Infant_1_EC_28_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5836..7380)
DNA (1545bp) protein (515aa)
Nitrate reductase 2 (NRZ), beta subunit {ECO:0000313|EMBL:CAR12922.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CAR12922.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
nitrate reductase subunit beta rbh
Respiratory nitrate reductase 2 beta chain n=625 Tax=Enterobacteriaceae RepID=NARY_ECOLI
Infant_1_EC_28_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7377..11117)
DNA (3741bp) protein (1247aa)
narZ; nitrate reductase 2, alpha subunit rbh
Nitrate reductase 2, alpha subunit {ECO:0000313|EMBL:EIL49934.1}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
Respiratory nitrate reductase 2 alpha chain n=631 Tax=Bacteria RepID=NARZ_ECOLI
Infant_1_EC_28_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11199..12587)
DNA (1389bp) protein (463aa)
narU; nitrite extrusion protein 2
Nitrite extrusion protein 2 {ECO:0000313|EMBL:ESA64628.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
Nitrite extrusion protein 2 n=457 Tax=Enterobacteriaceae RepID=NARU_ECOLI
Infant_1_EC_28_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12911..14206)
DNA (1296bp) protein (432aa)
glycoprotein with ribonuclease inhibitor domain (yddK, modular protein)
Uncharacterized protein {ECO:0000313|EMBL:EMX49528.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Leucine Rich repeat protein n=27 Tax=Enterobacteriaceae RepID=D7X2U8_ECOLX
Infant_1_EC_28_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14266..14556)
DNA (291bp) protein (97aa)
yddL; putative lipoprotein
Outer membrane porin protein ompD {ECO:0000313|EMBL:ELE00825.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
Putative uncharacterized protein YddL n=201 Tax=Enterobacteriaceae RepID=YDDL_ECOLI
Infant_1_EC_28_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14815..15639)
DNA (825bp) protein (275aa)
yddG; hypothetical protein
Inner membrane protein YddG {ECO:0000313|EMBL:EGI17622.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
Aromatic amino acid exporter YddG n=471 Tax=Enterobacteriaceae RepID=YDDG_ECOLI
Infant_1_EC_28_14
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15928..16515
DNA (588bp) protein (196aa)
formate dehydrogenase, subunit alpha (EC:1.7.99.4)
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:EIQ21677.1}; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
Formate dehydrogenase, nitrate-inducible, major subunit n=780 Tax=Enterobacteriaceae RepID=FDNG_ECOLI
Infant_1_EC_28_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16625..18940
DNA (2316bp) protein (772aa)
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:KEN70462.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KEN70462.1};; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
fdnG; formate dehydrogenase-N subunit alpha, nitrate-inducible (EC:1.2.1.2)
Formate dehydrogenase, nitrate-inducible, major subunit n=780 Tax=Enterobacteriaceae RepID=FDNG_ECOLI
Infant_1_EC_28_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18953..19837
DNA (885bp) protein (295aa)
formate dehydrogenase, nitrate-inducible, iron-sulfur subunit
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:END93075.1}; EC=1.2.1.2 {ECO:0000313|EMBL:END93075.1};; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit n=646 Tax=Bacteria RepID=FDNH_ECOLI
Infant_1_EC_28_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19830..20483
DNA (654bp) protein (218aa)
formate dehydrogenase-N subunit gamma
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:ENH03269.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ENH03269.1};; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Formate dehydrogenase, nitrate-inducible, cytochrome b556(fdn) subunit n=647 Tax=Enterobacteriaceae RepID=FDNI_ECO57
Infant_1_EC_28_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20534..20818)
DNA (285bp) protein (95aa)
yddM; putative DNA-binding transcriptional regulator
Addiction module antidote protein HigA {ECO:0000313|EMBL:EIG83836.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
Uncharacterized HTH-type transcriptional regulator YddM n=441 Tax=Enterobacteriaceae RepID=YDDM_ECOL6
Infant_1_EC_28_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20965..21975)
DNA (1011bp) protein (337aa)
Alcohol dehydrogenase, propanol-preferring {ECO:0000313|EMBL:ESA64547.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
adhP; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, propanol-preferring n=633 Tax=Enterobacteriaceae RepID=ADHP_ECOLI
Infant_1_EC_28_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22109..23806)
DNA (1698bp) protein (566aa)
NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};; TaxID=1268978 species="Bacteria; Proteoba
malate dehydrogenase (EC:1.1.1.38)
NAD-dependent malic enzyme n=675 Tax=Enterobacteriaceae RepID=MAO1_ECO24
Infant_1_EC_28_21
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23963..24100)
DNA (138bp) protein (46aa)
rpsV; 30S ribosomal subunit S22
Stationary-phase-induced ribosome-associated protein {ECO:0000313|EMBL:EOV50270.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
Stationary-phase-induced ribosome-associated protein n=437 Tax=Enterobacteriaceae RepID=SRA_ECO57
Infant_1_EC_28_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24202..24417)
DNA (216bp) protein (72aa)
Biofilm-dependent modulation protein Bdm, putative
Putative biofilm-dependent modulation protein {ECO:0000313|EMBL:EII21595.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
Protein bdm homolog n=431 Tax=cellular organisms RepID=BDM_ECO57
Infant_1_EC_28_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24763..25194
DNA (432bp) protein (144aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin osmC {ECO:0000313|EMBL:EZJ52188.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EZJ52188.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
Peroxiredoxin OsmC n=647 Tax=Enterobacteriaceae RepID=OSMC_ECOLI
Infant_1_EC_28_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25250..26176)
DNA (927bp) protein (309aa)
peptide ABC transporter ATP-binding protein rbh
Peptide ABC transporter ATP-binding component {ECO:0000313|EMBL:BAG77097.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
Probable D,D-dipeptide transport ATP-binding protein DdpF n=389 Tax=Enterobacteriaceae RepID=DDPF_ECOLI
Infant_1_EC_28_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26169..27155)
DNA (987bp) protein (329aa)
Putative oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:ESA64554.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
ddpD; ABC transporter ATP-binding protein
Probable D,D-dipeptide transport ATP-binding protein DdpD n=401 Tax=Enterobacteriaceae RepID=DDPD_ECOLI
Infant_1_EC_28_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27152..28048)
DNA (897bp) protein (299aa)
D-ala-D-ala transporter subunit
D-ala-D-ala transporter subunit {ECO:0000313|EMBL:EZE18889.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
Probable D,D-dipeptide transport system permease protein DdpC n=401 Tax=Enterobacteriaceae RepID=DDPC_ECOLI
Infant_1_EC_28_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28045..29067)
DNA (1023bp) protein (341aa)
yddR; D-ala-D-ala transporter subunit
D-ala-D-ala transporter subunit {ECO:0000313|EMBL:CCQ28652.2}; Peptide ABC transporter permease {ECO:0000313|EMBL:KJW23524.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
Probable D,D-dipeptide transport system permease protein DdpB n=398 Tax=Enterobacteriaceae RepID=DDPB_ECOLI
Infant_1_EC_28_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29069..30619)
DNA (1551bp) protein (517aa)
DdpA protein {ECO:0000313|EMBL:CAU97472.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain
D-ala-D-a la transporter subunit rbh
Probable D,D-dipeptide-binding periplasmic protein DdpA n=368 Tax=Enterobacteriaceae RepID=DDPA_ECOLI
Infant_1_EC_28_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30633..31214)
DNA (582bp) protein (194aa)
D-alanyl-D-alanine dipeptidase (EC:3.4.13.22)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4
D-alanyl-D-alanine dipeptidase n=390 Tax=Enterobacteriaceae RepID=DDPX_ECOLI
Infant_1_EC_28_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31472..33871)
DNA (2400bp) protein (800aa)
Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase {ECO:0000313|EMBL:ESA64559.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Oxygen sensor protein DosP n=316 Tax=Enterobacteriaceae RepID=DOSP_ECOLI
Displaying items 1-30 of 34 in total

View Taxonomy