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Infant_1_EC_36

Alias: scaffold_198

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_EC_36_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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340..894
DNA (555bp) protein (185aa)
putative transferase
Carbonic anhydrase, family 3 {ECO:0000313|EMBL:EGU95741.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
Bacterial transferase hexapeptide repeat protein n=45 Tax=Enterobacteriaceae RepID=D7YCG0_ECOLX
Infant_1_EC_36_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(870..1127)
DNA (258bp) protein (86aa)
Uncharacterized protein YrdB n=460 Tax=Enterobacteriaceae RepID=YRDB_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK17428.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
Infant_1_EC_36_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1124..1942)
DNA (819bp) protein (273aa)
aroE; dehydroshikimate reductase, NAD(P)-binding rbh
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=576 Tax=Bacteria RepID=AROE_ECOBW
Infant_1_EC_36_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1947..2519)
DNA (573bp) protein (191aa)
yrdC; ribosome maturation factor
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852,
tRNA threonylcarbamoyladenosine biosynthesis protein RimN n=472 Tax=Enterobacteriaceae RepID=RIMN_ECO24
Infant_1_EC_36_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2524..3066)
DNA (543bp) protein (181aa)
yrdD; DNA topoisomerase
Uncharacterized protein {ECO:0000313|EMBL:EZE21740.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Uncharacterized protein YrdD n=348 Tax=Enterobacteriaceae RepID=YRDD_ECOLI
Infant_1_EC_36_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3095..3568)
DNA (474bp) protein (158aa)
hypothetical protein
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12
Protein smg n=726 Tax=Enterobacteriaceae RepID=SMG_ECO24
Infant_1_EC_36_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3540..4664)
DNA (1125bp) protein (375aa)
smf; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE21742.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Protein smf n=466 Tax=Enterobacteriaceae RepID=SMF_ECOLI
Infant_1_EC_36_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4794..5303
DNA (510bp) protein (170aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=699 Tax=Enterobacteriaceae RepID=DEF_CITK8
Infant_1_EC_36_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5318..6265
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase n=485 Tax=Enterobacteriaceae RepID=FMT_ECO24
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1444219 species="
Infant_1_EC_36_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6311..7600
DNA (1290bp) protein (430aa)
rsmB; 16S rRNA methyltransferase GidB
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rR
Ribosomal RNA small subunit methyltransferase B n=484 Tax=Bacteria RepID=RSMB_SHIFL
Infant_1_EC_36_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7622..8998
DNA (1377bp) protein (459aa)
trkA; potassium transporter peripheral membrane protein
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EIG80901.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
Trk system potassium uptake protein TrkA n=747 Tax=Enterobacteriaceae RepID=TRKA_ECO57
Infant_1_EC_36_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9128..9538
DNA (411bp) protein (137aa)
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
Large-conductance mechanosensitive channel n=688 Tax=Enterobacteriaceae RepID=MSCL_ECO45
Infant_1_EC_36_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9535..9753)
DNA (219bp) protein (73aa)
yhdL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMU67567.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Alternative ribosome-rescue factor A n=187 Tax=Enterobacteriaceae RepID=ARFA_ECOLI
Infant_1_EC_36_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9809..10234)
DNA (426bp) protein (142aa)
zntR; zinc-responsive transcriptional regulator
Zn(II)-responsive transcriptional regulator {ECO:0000313|EMBL:EGB65370.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
HTH-type transcriptional regulator ZntR n=384 Tax=Enterobacteriaceae RepID=ZNTR_ECO57
Infant_1_EC_36_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10245..10613)
DNA (369bp) protein (123aa)
hypothetical protein
PF09350 domain protein {ECO:0000313|EMBL:EII23055.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
Uncharacterized protein YhdN n=465 Tax=Enterobacteriaceae RepID=YHDN_ECOLI
Infant_1_EC_36_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10720..11103)
DNA (384bp) protein (128aa)
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
50S ribosomal protein L17 n=869 Tax=Bacteria RepID=RL17_SODGM
Displaying 16 items

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