ggKbase home page

Infant_1_BF_4

Alias: scaffold_7

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_BF_4_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(592..1824)
DNA (1233bp) protein (411aa)
putative transmembrane spore maturation-like protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EKA86829.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;
Uncharacterized protein n=18 Tax=Bacteroides RepID=C6I2V7_9BACE
Infant_1_BF_4_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1931..2629
DNA (699bp) protein (233aa)
hypothetical protein
DNA alkylation repair enzyme family protein {ECO:0000313|EMBL:EXZ46658.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroide
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I2V6_9BACE
Infant_1_BF_4_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2958..3986
DNA (1029bp) protein (343aa)
ruvB; putative holliday junction DNA helicase
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacter
Holliday junction ATP-dependent DNA helicase RuvB n=54 Tax=root RepID=RUVB_BACFN
Infant_1_BF_4_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4015..5511
DNA (1497bp) protein (499aa)
Uncharacterized protein {ECO:0000313|EMBL:EIY53854.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08
polysaccharide biosynthesis transmembrane protein
Polysaccharide biosynthesis transmembrane protein n=16 Tax=Bacteroides RepID=D1JQF8_9BACE
Infant_1_BF_4_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5514..6881
DNA (1368bp) protein (456aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE58399.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5
TIGR00341 family protein n=16 Tax=Bacteroides RepID=C6I2V1_9BACE
Infant_1_BF_4_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6933..9110
DNA (2178bp) protein (726aa)
Peptidase S46 family protein {ECO:0000313|EMBL:EYE48244.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str.
hypothetical protein
Uncharacterized protein n=16 Tax=Bacteroides RepID=K1FBF6_BACFG
Infant_1_BF_4_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9160..10023)
DNA (864bp) protein (288aa)
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY53857.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2U9_9BACE
Infant_1_BF_4_8
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10770..12713)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2U7_9BACE
putative RNA helicase dead-box protein
DEAD/DEAH box helicase {ECO:0000313|EMBL:EEZ25677.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Infant_1_BF_4_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12775..13830)
DNA (1056bp) protein (352aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY53859.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2U6_9BACE
Infant_1_BF_4_10
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14015..14935)
DNA (921bp) protein (307aa)
frk; putative fructokinase
Putative fructokinase {ECO:0000313|EMBL:CDD38481.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroid
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2U5_9BACE
Infant_1_BF_4_11
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14923..15528)
DNA (606bp) protein (202aa)
putative sugar isomerase SIS-domain protein
Putative sugar isomerase {ECO:0000313|EMBL:CDD38480.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacter
SIS domain-containing protein n=3 Tax=root RepID=E5WWB3_9BACE
Infant_1_BF_4_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15528..16058)
DNA (531bp) protein (177aa)
putative lysine decarboxylase
Putative lysine decarboxylase family protein {ECO:0000313|EMBL:EXY42802.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroid
TIGR00730 family protein n=16 Tax=Bacteroides RepID=C6I2U3_9BACE
Infant_1_BF_4_13
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16160..17407
DNA (1248bp) protein (416aa)
putative zinc protease YmxG
Putative zinc protease YmxG {ECO:0000313|EMBL:CDD38478.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bac
Uncharacterized protein n=17 Tax=Bacteroides RepID=C6I2U2_9BACE
Infant_1_BF_4_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17573..17947)
DNA (375bp) protein (125aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD46924.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YC
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I2U1_9BACE
Infant_1_BF_4_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18171..18701
DNA (531bp) protein (177aa)
acetyltransferase protein
Acetyltransferase family protein {ECO:0000313|EMBL:EXZ55850.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2U0_9BACE
Infant_1_BF_4_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18848..20056)
DNA (1209bp) protein (403aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
mannonate dehydratase
Mannonate dehydratase n=17 Tax=Bacteroides RepID=UXUA_BACFN
Infant_1_BF_4_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20153..20965)
DNA (813bp) protein (271aa)
uxuB; putative D-mannonate oxidoreductase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EXZ30596.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides f
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I2T8_9BACE
Infant_1_BF_4_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21094..21738)
DNA (645bp) protein (215aa)
hypothetical protein
WbqC-like family protein {ECO:0000313|EMBL:EXZ80533.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2T7_9BACE
Infant_1_BF_4_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21802..22737)
DNA (936bp) protein (312aa)
putative exported signal peptidase I
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroid
Signal peptidase I n=16 Tax=Bacteroides RepID=C6I2T6_9BACE
Infant_1_BF_4_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22745..24229)
DNA (1485bp) protein (495aa)
Signal peptidase I n=16 Tax=Bacteroides RepID=C6I2T5_9BACE
Signal peptidase I {ECO:0000313|EMBL:EXY72153.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EXY72153.1};; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;
possible signal peptidase
Infant_1_BF_4_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24234..24962)
DNA (729bp) protein (243aa)
putative dihydrodipicolinate reductase
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Ba
Dihydrodipicolinate reductase n=3 Tax=Bacteroides fragilis RepID=E4VWP5_BACFG
Infant_1_BF_4_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25058..26326
DNA (1269bp) protein (423aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYA21330.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2T3_9BACE
Infant_1_BF_4_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26418..26978
DNA (561bp) protein (187aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY92795.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2T2_9BACE
Infant_1_BF_4_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27172..28104)
DNA (933bp) protein (311aa)
hypothetical protein
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; B
tRNA-dihydrouridine synthase n=13 Tax=Bacteroides RepID=Q5LIU8_BACFN
Infant_1_BF_4_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28111..29331)
DNA (1221bp) protein (407aa)
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:EXY42815.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis s
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2T0_9BACE
Infant_1_BF_4_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29562..30203
DNA (642bp) protein (214aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00106.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I2S9_9BACE
Infant_1_BF_4_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30305..31075)
DNA (771bp) protein (257aa)
UDP-N-acetylglucosamine acetyltransferase
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267, ECO:0000313|EMBL:CBW20749.1};; TaxID=862962 species
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=16 Tax=Bacteroides RepID=C6I2S8_9BACE
Infant_1_BF_4_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31095..32486)
DNA (1392bp) protein (464aa)
putative outer membrane lipoprotein
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:EIZ01783.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacter
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=16 Tax=Bacteroides RepID=C6I2S7_9BACE
Infant_1_BF_4_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32503..35706)
DNA (3204bp) protein (1068aa)
putative AcrB/AcrD family RND transport protein
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY53879.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" so
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=17 Tax=Bacteroides RepID=C6I2S6_9BACE
Infant_1_BF_4_30
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35731..36885)
DNA (1155bp) protein (385aa)
putative AcrA/AcrE RND transport or HlyD secretion family protein
AcrA/AcrE family multidrug resistance protein {ECO:0000313|EMBL:CDD38456.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samp
Efflux transporter, RND family, MFP subunit n=13 Tax=Bacteroides RepID=C6I2S5_9BACE
Displaying items 1-30 of 175 in total

View Taxonomy