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Infant_1_BF_5

Alias: scaffold_10

Search features with annotation key words

Displaying items 1-30 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_BF_5_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(497..943)
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE45743.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I3D7_9BACE
Infant_1_BF_5_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(958..2196)
DNA (1239bp) protein (413aa)
putative major facilitator superfamily transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EXZ95207.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides frag
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I3D8_9BACE
Infant_1_BF_5_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2212..3396)
DNA (1185bp) protein (395aa)
hypothetical protein
N-acylglucosamine 2-epimerase family protein {ECO:0000313|EMBL:EXZ78980.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroid
Renin-binding protein-related protein n=16 Tax=Bacteroides RepID=Q64VM2_BACFR
Infant_1_BF_5_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3420..4337)
DNA (918bp) protein (306aa)
putative N-acetylneuraminate lyase
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EYE45740.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroi
Uncharacterized protein n=6 Tax=Bacteroides RepID=K5CQS1_9BACE
Infant_1_BF_5_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4635..5843
DNA (1209bp) protein (403aa)
putative ROK family transcriptional repressor protein
ROK family protein {ECO:0000313|EMBL:EYE45739.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I3E1_9BACE
Infant_1_BF_5_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5840..6304)
DNA (465bp) protein (155aa)
possible O-antigen related protein
Uncharacterized protein {ECO:0000313|EMBL:EIY97881.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05
Uncharacterized protein n=13 Tax=Bacteroides RepID=I3HUS7_BACFG
Infant_1_BF_5_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6304..6834)
DNA (531bp) protein (177aa)
Transcription termination factor nusG family protein {ECO:0000313|EMBL:EYB09648.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="B
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I3E3_9BACE
putative LPS-related regulatory protein
Infant_1_BF_5_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6810..7922)
DNA (1113bp) protein (371aa)
hypothetical protein rbh
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CAH07408.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fra
Uncharacterized protein n=16 Tax=Bacteroides RepID=K1FHX5_BACFG
Infant_1_BF_5_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7928..10477)
DNA (2550bp) protein (850aa)
Uncharacterized protein {ECO:0000313|EMBL:EIZ00575.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13
putative capsule polysaccharide export protein
Uncharacterized protein n=16 Tax=Bacteroides RepID=I8XES6_BACFG
Infant_1_BF_5_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10592..12496)
DNA (1905bp) protein (635aa)
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EYA39585.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
capsular polysaccharide biosynthesis protein CapD
UngD1 n=17 Tax=Bacteroides RepID=B5LCC7_BACFG
Infant_1_BF_5_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12965..13123)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:EYA19840.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007
Uncharacterized protein n=3 Tax=Bacteroides RepID=I0PYW4_9BACE
Infant_1_BF_5_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13190..14752
DNA (1563bp) protein (521aa)
Uncharacterized protein {ECO:0000313|EMBL:EIZ00572.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13
putative surface antigen
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I3E8_9BACE
Infant_1_BF_5_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15047..15193)
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:EXZ05983.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-2
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9BLB7_BACFG
Infant_1_BF_5_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15339..16217
DNA (879bp) protein (293aa)
DNA/RNA non-specific endonuclease family protein {ECO:0000313|EMBL:EXZ29160.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacte
putative endonuclease
DNA/RNA non-specific endonuclease n=13 Tax=Bacteroides RepID=D1JL00_9BACE
Infant_1_BF_5_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16375..17412
DNA (1038bp) protein (346aa)
YceG-like family protein {ECO:0000313|EMBL:EYE45728.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23
hypothetical protein
Aminodeoxychorismate lyase n=13 Tax=Bacteroides RepID=F7LNU5_9BACE
Infant_1_BF_5_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17496..19088
DNA (1593bp) protein (531aa)
putative indolepyruvate oxidoreductase/indolepyruvate ferredoxin oxidoreductase
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoredu
Indolepyruvate oxidoreductase subunit iorA n=54 Tax=root RepID=C3QC40_9BACE
Infant_1_BF_5_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19092..19676
DNA (585bp) protein (195aa)
putative indolepyruvate oxidoreductase subunit
Indolepyruvate oxidoreductase subunit IorB {ECO:0000313|EMBL:BAD48441.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
Indolepyruvate oxidoreductase subunit iorB n=45 Tax=Bacteroides RepID=C3QC39_9BACE
Infant_1_BF_5_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19781..21088
DNA (1308bp) protein (436aa)
phenylacetate-coenzyme A ligase
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1073387 species="Bacteria;
Uncharacterized protein n=54 Tax=Bacteroides RepID=A5ZHG4_9BACE
Infant_1_BF_5_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21174..21743
DNA (570bp) protein (190aa)
putative xanthine phosphoribosyltransferase (EC:2.4.2.-)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO
Xanthine phosphoribosyltransferase n=42 Tax=Bacteroides RepID=XPT_BACTN
Infant_1_BF_5_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21818..22609)
DNA (792bp) protein (264aa)
putative ferredoxin
4Fe-4S binding domain protein {ECO:0000313|EMBL:EXY91206.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I3F5_9BACE
Infant_1_BF_5_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23038..23388)
DNA (351bp) protein (117aa)
rplT; putative 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" s
50S ribosomal protein L20 n=91 Tax=root RepID=RL20_BACFN
Infant_1_BF_5_22
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23489..23686)
DNA (198bp) protein (66aa)
rpmI; putative 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; env
50S ribosomal protein L35 n=50 Tax=Bacteroides RepID=RL35_BACFN
Infant_1_BF_5_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23752..24405)
DNA (654bp) protein (218aa)
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroi
infC; putative translation initiation factor IF-3
Translation initiation factor IF-3 n=28 Tax=Bacteroides RepID=IF3_BACFN
Infant_1_BF_5_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24482..26422)
DNA (1941bp) protein (647aa)
thrS; putative threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=46 Tax=root RepID=SYT_BACFN
Infant_1_BF_5_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26503..28551)
DNA (2049bp) protein (683aa)
TPR repeat family protein {ECO:0000313|EMBL:EYB09632.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 37
putative exported Tpr repeat-family protein
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I3G0_9BACE
Infant_1_BF_5_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28854..30071
DNA (1218bp) protein (406aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY49348.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08
Uncharacterized protein n=12 Tax=Bacteroides RepID=I3HUU7_BACFG
Infant_1_BF_5_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30181..30735)
DNA (555bp) protein (185aa)
def; putative peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=16 Tax=Bacteroides RepID=DEF_BACFN
Infant_1_BF_5_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30771..31187)
DNA (417bp) protein (139aa)
ruvX; putative Holliday junction resolvase
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1339329 speci
Putative Holliday junction resolvase n=16 Tax=Bacteroides RepID=RUVX_BACFN
Infant_1_BF_5_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31309..32427)
DNA (1119bp) protein (373aa)
putative outer membrane protein
OmpA family protein {ECO:0000313|EMBL:EXY91210.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I3G4_9BACE
Infant_1_BF_5_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32489..33235)
DNA (747bp) protein (249aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYA19822.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007
Uncharacterized protein n=16 Tax=Bacteroides RepID=I9VMI6_BACFG
Displaying items 1-30 of 202 in total

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