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Infant_1_BF_20

Alias: scaffold_92

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_BF_20_1
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..76
DNA (75bp) protein (25aa)
Putative exported protein {ECO:0000313|EMBL:CDD43479.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacte
Uncharacterized protein n=34 Tax=Bacteroides RepID=K1G7M2_BACFG
Infant_1_BF_20_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(187..612)
DNA (426bp) protein (142aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8XME8_9BACE
hslR; putative ribosome-associated heat shock protein
S4 domain protein {ECO:0000313|EMBL:EXZ20422.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
Infant_1_BF_20_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(639..1202)
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
pth; putative peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=16 Tax=Bacteroides RepID=PTH_BACFN
Infant_1_BF_20_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1309..1899)
DNA (591bp) protein (197aa)
50S ribosomal protein L25 n=53 Tax=Bacteroides RepID=RL25_BACFN
putative ribosomal L25p family stress protein
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Ba
Infant_1_BF_20_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2044..2430)
DNA (387bp) protein (129aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47948.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YC
Uncharacterized protein n=16 Tax=Bacteroides RepID=K1FNU8_BACFG
Infant_1_BF_20_6
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2536..3525
DNA (990bp) protein (330aa)
Transcription antitermination factor NusB n=42 Tax=Bacteroides RepID=C6I4P1_9BACE
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental sample
putative N utilization substance protein
Infant_1_BF_20_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3572..3898
DNA (327bp) protein (109aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47950.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YC
Preprotein translocase, YajC subunit n=20 Tax=Bacteroides RepID=C6I4P0_9BACE
Infant_1_BF_20_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3922..4935
DNA (1014bp) protein (338aa)
hypothetical protein
YbbR-like family protein {ECO:0000313|EMBL:EXZ45580.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I4N9_9BACE
Infant_1_BF_20_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4925..5542
DNA (618bp) protein (206aa)
putative dephospho-CoA kinase
Dephospho-CoA kinase {ECO:0000255|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000255|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000255|HAMAP-Rule:MF_00376}; TaxID=272559 species="Bacteria; Ba
Dephospho-CoA kinase n=15 Tax=Bacteroides RepID=COAE_BACFN
Infant_1_BF_20_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5560..5976
DNA (417bp) protein (139aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ95446.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Kore
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I4N7_9BACE
Infant_1_BF_20_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6493..6702
DNA (210bp) protein (70aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ54611.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I4N6_9BACE
Infant_1_BF_20_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6778..9366)
DNA (2589bp) protein (863aa)
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L
endopeptidase Clp ATP-binding chain B
Chaperone protein ClpB n=58 Tax=root RepID=CLPB_BACTN
Infant_1_BF_20_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9589..10170
DNA (582bp) protein (194aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99918.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05
Uncharacterized protein n=14 Tax=Bacteroides RepID=C6I4N4_9BACE
Infant_1_BF_20_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10195..11091
DNA (897bp) protein (299aa)
putative transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EYE46695.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" so
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I4N3_9BACE
Infant_1_BF_20_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11171..12163
DNA (993bp) protein (331aa)
hypothetical protein rbh
Conserved hypothetical 698 family protein {ECO:0000313|EMBL:EYE55419.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
Uncharacterized protein n=18 Tax=Bacteroides RepID=C6I4N2_9BACE
Infant_1_BF_20_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12252..12935)
DNA (684bp) protein (228aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAD47959.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YC
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I4N1_9BACE
Infant_1_BF_20_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12942..13469)
DNA (528bp) protein (176aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87350.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I4N0_9BACE
Infant_1_BF_20_18
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13450..13965)
DNA (516bp) protein (172aa)
putative RNA polymerase ECF-type sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDD39197.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samp
Sigma-70 family RNA polymerase sigma factor n=15 Tax=Bacteroides RepID=C6I4M9_9BACE
Infant_1_BF_20_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14050..14331
DNA (282bp) protein (94aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99924.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I4M8_9BACE
Infant_1_BF_20_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14397..15440)
DNA (1044bp) protein (348aa)
RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1339273 species="Bacteria; Bacteroi
Protein RecA n=79 Tax=root RepID=RECA_BACFR
Infant_1_BF_20_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15451..15897)
DNA (447bp) protein (149aa)
bcp; putative bacterioferritin comigratory protein
AhpC/TSA family protein {ECO:0000313|EMBL:EXZ20442.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-14
Uncharacterized protein n=29 Tax=Bacteroides RepID=K1GCS8_BACFG
Infant_1_BF_20_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15980..17173)
DNA (1194bp) protein (398aa)
hypothetical protein
Saccharopine dehydrogenase family protein {ECO:0000313|EMBL:EXZ79511.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
Saccharopine dehydrogenase n=75 Tax=root RepID=C3R6F9_9BACE
Infant_1_BF_20_23
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17268..18518)
DNA (1251bp) protein (417aa)
Uncharacterized protein {ECO:0000313|EMBL:EGM97146.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I4M4_9BACE
Infant_1_BF_20_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18643..19434
DNA (792bp) protein (264aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87343.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I4M3_9BACE
Infant_1_BF_20_25
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19446..19556
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:CDD39217.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
Uncharacterized protein n=6 Tax=Bacteroides RepID=I3HU01_BACFG
Infant_1_BF_20_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19631..20635)
DNA (1005bp) protein (335aa)
putative iron transport-related family system permease protein
Uncharacterized protein {ECO:0000313|EMBL:EIY98759.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I4M2_9BACE
Infant_1_BF_20_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20632..21771)
DNA (1140bp) protein (380aa)
putative iron-related ABC transport periplasmic binding protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87340.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;
Uncharacterized protein n=13 Tax=Bacteroides RepID=I3HTZ9_BACFG
Infant_1_BF_20_28
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22181..22294
DNA (114bp) protein (38aa)
Uncharacterized protein {ECO:0000313|EMBL:CDD39220.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
Uncharacterized protein n=11 Tax=Bacteroides RepID=C6I4L9_9BACE
Infant_1_BF_20_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22304..24466
DNA (2163bp) protein (721aa)
Putative capsule polysaccharide export protein {ECO:0000313|EMBL:BAD47972.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroi
putative capsule polysaccharide export protein
Uncharacterized protein n=15 Tax=Bacteroides RepID=K1FRN9_BACFG
Infant_1_BF_20_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24474..24998
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:EIY50383.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08
putative transcriptional regulator
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I4L7_9BACE
Displaying items 1-30 of 43 in total

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