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OR_05152018_10m_0_1um_scaffold_17

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_05152018_10m_0_1um_scaffold_17_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215..928
DNA (714bp) protein (238aa)
Probable transcriptional regulatory protein VAPA_1c04600 n=1 Tax=Variovorax paradoxus B4 RepID=T1X625_VARPD
Probable transcriptional regulatory protein RT97_23680 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative transcriptional regulator
OR_05152018_10m_0_1um_scaffold_17_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1113..1625)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TT3_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD70820.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_3
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1813..2895)
DNA (1083bp) protein (361aa)
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component n=1 Tax=Polaromonas sp. CF318 RepID=J2TWU9_9BURK
twin-arginine translocation pathway signal protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
OR_05152018_10m_0_1um_scaffold_17_4
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3147..4232)
DNA (1086bp) protein (362aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG8_RHOFD
twin-arginine translocation pathway signal protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
OR_05152018_10m_0_1um_scaffold_17_5
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4416..6314)
DNA (1899bp) protein (633aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; EC=2.2.1.7 {ECO:0000255|HAMAP-Rule:MF_00315};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; Short=DXP synthase {ECO:0000255|HAMAP-Rule:MF_00315};; Short=DXPS {ECO:0000255|HAMAP-Rule:MF_00315};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=DXS_RHOFD
OR_05152018_10m_0_1um_scaffold_17_6
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6386..7342)
DNA (957bp) protein (319aa)
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ABD70587.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ABD70587.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Farnesyl-diphosphate synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG6_RHOFD
polyprenyl synthetase
OR_05152018_10m_0_1um_scaffold_17_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7327..7563)
DNA (237bp) protein (79aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG5_RHOFD
exonuclease VII small subunit
OR_05152018_10m_0_1um_scaffold_17_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7800..8969
DNA (1170bp) protein (390aa)
Rieske (2Fe-2S) protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG4_RHOFD
Rieske (2Fe-2S) protein
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:ABD70589.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_9
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9050..9925
DNA (876bp) protein (292aa)
Putative transmembrane protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG3_RHOFD
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ABD70590.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_10
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9959..10822
DNA (864bp) protein (288aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase {ECO:0000313|EMBL:ABD70591.1}; EC=2.8.1.2 {ECO:0000313|EMBL:ABD70591.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
3-mercaptopyruvate sulfurtransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG2_RHOFD
OR_05152018_10m_0_1um_scaffold_17_11
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..12213
DNA (1197bp) protein (399aa)
Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q223C6_RHOFD
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABD67877.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_12
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12267..13181
DNA (915bp) protein (305aa)
Glycosyl transferase, family 3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG0_RHOFD
glycosyl transferase family protein
Glycosyl transferase, family 3 {ECO:0000313|EMBL:ABD70593.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_13
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13178..14047
DNA (870bp) protein (290aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABD70594.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABD70594.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF9_RHOFD
uroporphyrin-III C-methyltransferase
OR_05152018_10m_0_1um_scaffold_17_14
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14112..15356
DNA (1245bp) protein (415aa)
HI0933-like protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF8_RHOFD
hypothetical protein
HI0933-like protein {ECO:0000313|EMBL:ABD70595.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_15
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15465..17033
DNA (1569bp) protein (523aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZJG4_9PROT
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ADZ25202.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
OR_05152018_10m_0_1um_scaffold_17_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17203..17415
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS21_RHOFD
rpsU; 30S ribosomal protein S21
Tax=CG_Rhodof_04
OR_05152018_10m_0_1um_scaffold_17_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17602..18048
DNA (447bp) protein (149aa)
GatB/Yqey n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF6_RHOFD
hypothetical protein
GatB/Yqey {ECO:0000313|EMBL:ABD70597.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_18
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18045..19943
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4D6D5
Uncharacterized protein {ECO:0000313|EMBL:KGM40587.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
diguanylate cyclase
OR_05152018_10m_0_1um_scaffold_17_19
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19957..21363)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF5_RHOFD
peptidase U62, modulator of DNA gyrase
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
OR_05152018_10m_0_1um_scaffold_17_20
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21387..22001
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF4_RHOFD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
OR_05152018_10m_0_1um_scaffold_17_21
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21998..22603
DNA (606bp) protein (202aa)
Molybdopterin adenylyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF3_RHOFD
mogA; molybdenum cofactor biosynthesis protein MogA
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:ABD70600.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_22
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22669..23442)
DNA (774bp) protein (258aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase {ECO:0000313|EMBL:ABD70601.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ABD70601.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Serine acetyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF2_RHOFD
OR_05152018_10m_0_1um_scaffold_17_23
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23452..24438)
DNA (987bp) protein (329aa)
RNA methyltransferase TrmH, group 1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF1_RHOFD
RNA methyltransferase TrmH
RNA methyltransferase TrmH, group 1 {ECO:0000313|EMBL:ABD70602.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_24
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24451..25377
DNA (927bp) protein (309aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
Inositol-1(Or 4)-monophosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF0_RHOFD
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
OR_05152018_10m_0_1um_scaffold_17_25
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25651..26664
DNA (1014bp) protein (338aa)
PEP motif putative anchor domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TBL3_9DELT
PEP motif putative anchor domain protein {ECO:0000313|EMBL:EPR34552.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
hypothetical protein
OR_05152018_10m_0_1um_scaffold_17_26
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26684..30013)
DNA (3330bp) protein (1110aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UE9_RHOFD
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABD70604.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
OR_05152018_10m_0_1um_scaffold_17_27
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30015..31373)
DNA (1359bp) protein (453aa)
HI0933-like protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UE7_RHOFD
hypothetical protein
HI0933-like protein {ECO:0000313|EMBL:ABD70606.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_05152018_10m_0_1um_scaffold_17_28
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31370..34906)
DNA (3537bp) protein (1179aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
UvrD/REP helicase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UE6_RHOFD
UvrD/REP helicase
OR_05152018_10m_0_1um_scaffold_17_29
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35053..35493)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WNL3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:CDS54762.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
OR_05152018_10m_0_1um_scaffold_17_30
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35503..36345)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X810_DELAC
Phage (Mu-like) virion morphogenesis protein {ECO:0000313|EMBL:CDS54761.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
putative head morphogenesis protein SPP1 gp7
Displaying items 1-30 of 97 in total

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