ggKbase home page

OR_05212015_5_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 79 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_05212015_5_scaffold_35_1
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..911
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S2Q0_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV96878.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_05212015_5_scaffold_35_2
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

875..3361
DNA (2487bp) protein (829aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SZB0_9HELI
Chemotaxis protein CheA {ECO:0000313|EMBL:KFN40408.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
hypothetical protein
OR_05212015_5_scaffold_35_3
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3364..3858
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S868_9HELI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_05212015_5_scaffold_35_4
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3894..5204
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SKE8_9HELI
hypothetical protein
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_05212015_5_scaffold_35_5
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5204..5902
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0E0_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR33237.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_05212015_5_scaffold_35_6
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5980..8556
DNA (2577bp) protein (859aa)
ATPase AAA-2 domain-containing protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S871_9HELI
ATPase AAA-2 domain-containing protein {ECO:0000313|EMBL:AFV96885.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
ATPase AAA-2 domain-containing protein
OR_05212015_5_scaffold_35_7
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8687..8920
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SKF2_9HELI
Uncharacterized protein {ECO:0000313|EMBL:KFN40401.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
hypothetical protein
OR_05212015_5_scaffold_35_8
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8928..9194
DNA (267bp) protein (89aa)
Sugar transporter, putative Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TK91_CALNY
sugar transporter, putative
Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
OR_05212015_5_scaffold_35_9
unknown

Not on your lists

comp(9198..9638)
DNA (441bp) protein (147aa)

This feature has no annotations

OR_05212015_5_scaffold_35_10
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9678..10217)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0E3_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR33240.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_05212015_5_scaffold_35_11
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


10358..10498
DNA (141bp) protein (47aa)
50S ribosomal protein L34 Tax=Arcobacter butzleri RepID=RL34_ARCB4
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
OR_05212015_5_scaffold_35_12
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

10510..10839
DNA (330bp) protein (110aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Ribonuclease P protein component Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0E5_SULKY
ribonuclease p protein component
OR_05212015_5_scaffold_35_13
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

11165..12769
DNA (1605bp) protein (535aa)
Membrane protein insertase YidC Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SKF8_9HELI
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
membrane protein insertase
OR_05212015_5_scaffold_35_14
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

12756..13589
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0E8_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR33245.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_05212015_5_scaffold_35_15
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13596..14939
DNA (1344bp) protein (448aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
tRNA modification GTPase MnmE Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S2R0_9HELI
trmE; tRNA modification GTPase TrmE
OR_05212015_5_scaffold_35_16
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

14939..15331
DNA (393bp) protein (131aa)
Putative Holliday junction resolvase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0F0_SULKY
holliday junction resolvase yqgf
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_05212015_5_scaffold_35_17
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15434..16456
DNA (1023bp) protein (341aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SZD2_9HELI
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_05212015_5_scaffold_35_18
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16516..17541
DNA (1026bp) protein (342aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0F3_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR33250.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_05212015_5_scaffold_35_19
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17614..18390
DNA (777bp) protein (259aa)
Smf family protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SKH1_9HELI
DNA polymerase III {ECO:0000313|EMBL:KFN38860.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
smf family protein
OR_05212015_5_scaffold_35_20
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18403..18723)
DNA (321bp) protein (107aa)
sulfite dehydrogenase (cytochrome) subunit sorb (EC:1.8.2.1)
Sulfite dehydrogenase (Cytochrome) subunit SorB {ECO:0000313|EMBL:ADR33261.1}; EC=1.8.2.1 {ECO:0000313|EMBL:ADR33261.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Sulfite dehydrogenase (Cytochrome) subunit SorB Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0G4_SULKY
OR_05212015_5_scaffold_35_21
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18734..19954)
DNA (1221bp) protein (407aa)
sulfite dehydrogenase (cytochrome) subunit sora apoprotein (EC:1.8.2.1)
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein {ECO:0000313|EMBL:ADR33262.1}; EC=1.8.2.1 {ECO:0000313|EMBL:ADR33262.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0G5_SULKY
OR_05212015_5_scaffold_35_22
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20005..21045)
DNA (1041bp) protein (347aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0G6_SULKY
s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_05212015_5_scaffold_35_23
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21023..21805)
DNA (783bp) protein (261aa)
Sec-independent protein translocase protein TatC Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0G7_SULKY
sec-independent protein translocase tatc
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_05212015_5_scaffold_35_24
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21805..22167)
DNA (363bp) protein (121aa)
Sec-independent protein translocase protein TatB Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SKH7_9HELI
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
hypothetical protein
OR_05212015_5_scaffold_35_25
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22253..23314)
DNA (1062bp) protein (354aa)
Oxygen-independent coproporphyrinogen III oxidase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0G9_SULKY
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ADR33266.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_05212015_5_scaffold_35_26
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23374..23844
DNA (471bp) protein (157aa)
NUDIX hydrolase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0H0_SULKY
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADR33267.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_05212015_5_scaffold_35_27
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23844..25055
DNA (1212bp) protein (404aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0H1_SULKY
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_05212015_5_scaffold_35_28
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

25055..25606
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S2S8_9HELI
Uncharacterized protein {ECO:0000313|EMBL:KFN38851.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
hypothetical protein
OR_05212015_5_scaffold_35_29
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

25593..26216
DNA (624bp) protein (208aa)
Putative DNA polymerase III delta prime subunit HolB Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0P4_SULKY
Uncharacterized protein {ECO:0000313|EMBL:KFN38850.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
DNA polymerase III subunit delta'
OR_05212015_5_scaffold_35_30
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

26206..27345
DNA (1140bp) protein (380aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000313|EMBL:ADR33271.1}; EC=2.5.1.15 {ECO:0000313|EMBL:ADR33271.1};; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Dihydropteroate synthase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0P5_SULKY
Displaying items 1-30 of 79 in total

View Taxonomy