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OR_07102018_0_5m_scaffold_2

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Displaying items 1-30 of 671 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_2_1
unknown

Not on your lists

2..709
DNA (708bp) protein (236aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_2_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(892..1212)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037C6488
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB81766.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
OR_07102018_0_5m_scaffold_2_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1455..2828
DNA (1374bp) protein (458aa)
Transposase, IS4 family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VA06_SPHWW
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:ABQ69122.1}; Transposase, IS4 family protein {ECO:0000313|EMBL:ABQ71235.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_07102018_0_5m_scaffold_2_4
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3151..4143)
DNA (993bp) protein (331aa)
Arylesterase/monoxygenase n=1 Tax=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) RepID=Q9RZT0_DEIRA
Arylesterase/monoxygenase {ECO:0000313|EMBL:GAN54638.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
arylesterase
OR_07102018_0_5m_scaffold_2_5
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4140..4952)
DNA (813bp) protein (271aa)
fpr; ferredoxin--NADP reductase (EC:1.18.1.2)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003618494
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
OR_07102018_0_5m_scaffold_2_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5057..6739
DNA (1683bp) protein (561aa)
fatty acid--CoA ligase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3BD
AMP-binding domain-containing protein
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACA16779.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
OR_07102018_0_5m_scaffold_2_7
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6782..7528)
DNA (747bp) protein (249aa)
3-alpha-hydroxysteroid dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC893
3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:EJI93893.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
short-chain dehydorgenase/reductase
OR_07102018_0_5m_scaffold_2_8
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7553..7849)
DNA (297bp) protein (99aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J4C9_FRASC
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EWM68638.1}; Flags: Fragment;; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
antibiotic biosynthesis monooxygenase
OR_07102018_0_5m_scaffold_2_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8132..10516
DNA (2385bp) protein (795aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HU59_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB01069.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
TonB-dependent receptor
OR_07102018_0_5m_scaffold_2_10
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10553..11293
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B5A3_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH10044.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_11
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11322..11894
DNA (573bp) protein (191aa)
Cytochrome c oxidase subunit III n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B426_FRADG
cytochrome c oxidase subunit III
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:AEH10045.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_12
unknown

Not on your lists

11891..12154
DNA (264bp) protein (88aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_2_13
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12219..13457
DNA (1239bp) protein (413aa)
Cytochrome P450 superfamily protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MEQ5_9NOCA
Cytochrome P450 superfamily protein {ECO:0000313|EMBL:CCW13853.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
cytochrome P450
OR_07102018_0_5m_scaffold_2_14
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13459..14250
DNA (792bp) protein (264aa)
crotonase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC894
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEH10320.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_15
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14274..14477
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MDZ9_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:CCW13852.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
OR_07102018_0_5m_scaffold_2_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14474..15700)
DNA (1227bp) protein (409aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SB73_9SPHN
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AGH47917.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
OR_07102018_0_5m_scaffold_2_17
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15697..16875)
DNA (1179bp) protein (393aa)
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEH10312.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEH10312.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
formyl-CoA transferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC886
OR_07102018_0_5m_scaffold_2_18
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16872..17159)
DNA (288bp) protein (96aa)
amidohydrolase 2 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC887
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AEH10319.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_19
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17156..18232)
DNA (1077bp) protein (359aa)
amidohydrolase 2 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC888
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AEH10319.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_20
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18229..19041)
DNA (813bp) protein (271aa)
enoyl-CoA hydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC889
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEH10325.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_21
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19045..20211)
DNA (1167bp) protein (389aa)
protanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase {ECO:0000313|EMBL:AEH10324.1}; EC=2.3.1.176 {ECO:0000313|EMBL:AEH10324.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
thiolase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88A
OR_07102018_0_5m_scaffold_2_22
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20208..21797)
DNA (1590bp) protein (530aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCW13877.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCW13877.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
AMP-dependent synthetase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88B
putative fatty-acid--CoA ligase
OR_07102018_0_5m_scaffold_2_23
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21794..22180)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88C
Uncharacterized protein {ECO:0000313|EMBL:CCW13876.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
hypothetical protein
OR_07102018_0_5m_scaffold_2_24
Rhodococcus sp. NCIMB 9784, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22184..23404)
DNA (1221bp) protein (407aa)
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88D
Non-specific lipid carrier-like protein {ECO:0000313|EMBL:AAK50624.1}; TaxID=157732 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NCIMB 9784.;"
acetyl-CoA acetyltransferase-like protein
OR_07102018_0_5m_scaffold_2_25
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23397..23885)
DNA (489bp) protein (163aa)
dehydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88E
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AEH10321.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_26
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23965..24591)
DNA (627bp) protein (209aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88F
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCW13880.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
TetR family transcriptional regulator
OR_07102018_0_5m_scaffold_2_27
Rhodococcus sp. NCIMB 9784, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24610..25746)
DNA (1137bp) protein (379aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
butyryl-CoA dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC890
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AAQ73463.1}; TaxID=157732 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NCIMB 9784.;"
OR_07102018_0_5m_scaffold_2_28
Rhodococcus sp. NCIMB 9784, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25862..27601
DNA (1740bp) protein (580aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
long-chain-fatty-acid--CoA ligase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC891
Acyl-CoA ligase {ECO:0000313|EMBL:AAQ73465.1}; TaxID=157732 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NCIMB 9784.;"
OR_07102018_0_5m_scaffold_2_29
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27619..28782
DNA (1164bp) protein (388aa)
(2Fe-2S)-binding protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC892
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEH10309.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
OR_07102018_0_5m_scaffold_2_trna_8
unknown

Not on your lists

comp(29205..29278)
DNA (74bp)
transferRNA Pro
Displaying items 1-30 of 671 in total

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